LOCUS BC024700 3276 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretory carrier membrane protein 5, mRNA (cDNA clone
MGC:24969 IMAGE:4941050), complete cds.
ACCESSION BC024700
VERSION BC024700.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3276)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3276)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544128.
FEATURES Location/Qualifiers
source 1..3276
/db_xref="H-InvDB:HIT000039829"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24969 IMAGE:4941050"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3276
/gene="SCAMP5"
/gene_synonym="MGC24969"
/db_xref="GeneID:192683"
/db_xref="HGNC:HGNC:30386"
CDS 31..738
/gene="SCAMP5"
/gene_synonym="MGC24969"
/codon_start=1
/product="secretory carrier membrane protein 5"
/protein_id="AAH24700.1"
/db_xref="GeneID:192683"
/db_xref="HGNC:HGNC:30386"
/translation="MAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLW
MLNSVTLAVNLVGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSS
FSFMAFFFTFMAQLVISIIQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTV
MAVFSFIALSMVHKFYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQ
PQTQYSATPNYTYSNEM"
BASE COUNT 621 a 950 c 865 g 840 t
ORIGIN
1 gggcaggcca ctgggccagc tggtaacatc atggcagaga aagtgaacaa cttcccacca
61 ttgcccaaat tcatcccgct gaagccatgt ttctaccaag acttcgaggc agatattcct
121 ccccagcatg tcagcatgac caagcgcctc tactacctct ggatgttgaa cagcgtcacg
181 ctggccgtga acctggtggg ctgtctcgcg tggctgatcg gaggcggggg agccaccaac
241 tttggcctcg cctttctctg gctcatcctc ttcacaccct gctcctacgt ctgctggttt
301 cggcccattt acaaggcctt caagactgac agctccttca gtttcatggc attcttcttt
361 accttcatgg ctcagttggt catcagcatc atccaggccg tgggcatccc aggctggggc
421 gtctgcggct ggattgctac catctccttc ttcggaacga acattggctc ggcggtggtg
481 atgctaattc ccactgtcat gttcacagtg atggccgtct tttccttcat cgccctcagc
541 atggttcata aattttaccg gggaagtggg gggagtttca gcaaagctca ggaggagtgg
601 accacagggg cctggaagaa tccacatgtg cagcaggcag cccagaacgc agccatgggg
661 gcagcccagg gtgccatgaa tcagcctcag actcagtatt ccgccacccc caattacacg
721 tactccaatg agatgtgaac cagccacgcc taccaggtgg cagagctggg gccattggga
781 cagggggctc aagccacatc gtcatttgtg gttaccaagc agggttcccc cttccctttt
841 ctccttccct actttgtaca aaggaccaga gttatatata tatatatatg tatatgtctg
901 taccccagcc cccacctttc agattctgct cttggcactc agctgtgggc tgcacgtgga
961 gctgtcccgt gcggtagtag ctgtgtctgt gtcccctcgt gaaatagtgt gcagtggagg
1021 tctcttgtgg tgctagatgt gtgtttagag ctaaaccagc ccccaccccc accctccacc
1081 tgcccctctt gcctctggcc cctctgaccc tggcccaggg acccctcacg gggccagggg
1141 aggcatagca gaaagactgg ccccttccta gggttatgag ctggaactgt ttctactttc
1201 agtcttcctg ggaagtaaca gtacttagca ctcttggtgg tgggtgggag ggtgggtaca
1261 ggccagggat attcccttgc tcttttgatc cctccaggcc tcgcctcctt cagcctcctc
1321 ctccctcatc tgttccctga tgtcacattc cctgtgcaat cttcccttgc ccatggtctg
1381 tctatctctt tcctatgtgg cttttctttg tcttccccaa ggctgagtgt cccagtttta
1441 tctgctcctg agactgagcc cagatcccca aatctaatct gatttacagt tcaaggaagc
1501 tgatggggag ctgggcctta cccctgatgt aggaggggca cacagctggg ggtgcagagc
1561 ccacctgggt acctgacccc caggggatga aaatgcaagg atgagtctgc ttgggcctga
1621 gagtttgatc tgcaggggca ggctcatctt ttctctcccc tgccttctcc tccttctctc
1681 cccagagccc ccttgagccc ctctgcctat gtccctctgc ctcctcccca tgcccccagt
1741 tgctgtggct tgattctgct accctgaccc caccatgtgc caggtggcat ctgccttact
1801 gccttccctg aggagctggg acatgctggg cagttgtcag atgtaaaggc acagctggag
1861 cagagggcat gtcagtaatg attggtccct ggggaaggtc tggctggctc cagcacagtg
1921 aggcatttag gtatctctcg gtgaccgttg gattcctgga agcagtagct gttctgtttg
1981 gatctggtag gacagggctc agagggctag gcacggaggg aaggtcagag gagaaggcag
2041 gcagggccca gtgagagggg agcatgcctt cccccaccct ggcttgctct tggtcacagg
2101 gcggttctgg gcacttgaac tcagggccca agcagaagca caggcccagt cctggctgca
2161 agcacaatag cctgaatggg atttcaggtt aggcagggtg ggaggggagg ctctctggct
2221 ttagttttgt tttgttttcc aaatcaaggt aacttgctcc cttctgccta caggccttgg
2281 tcttggcttg tcctcaccca gtcggaactc cctaccactt tcaggagagt ggttttaggc
2341 ccgtggggct gttctgttcc aagcagtgtg agaacatggc tggtagaggc tctagctgtg
2401 tgcggggcct gaaggggagt gggttctcgc ccaaagagca tctgcccatt tcccaccttc
2461 ccttctccca ccagaagctt gcctgagctg tttggacaaa aatccaaacc ccacttggct
2521 actctggcct ggcttcagct tggaacccaa tacctaggct tacaggccat cctgagccag
2581 gggcctctgg aaattctctt cctgatggtc ctttaggttt gggcacaaaa tataattgcc
2641 tctcccctct cccattttct ctcttgggag caatggtcac agtccctggt acctgaaaag
2701 gtacctaggt ctaggccctt cttccctttc ccttcctctc ccctacccca gaactttggc
2761 tccctttccc ttctctctct ggtagctcca ggaggcctgt gatccagctc cctgcctagc
2821 atccatgacc tgttggatgt tacctccaat cagtttcctg tcctacctgc ctctttggct
2881 tggacctata tggccatgct ctggctctac ccttgggaag cctgatcccg gtgtgtggcc
2941 cagcttgttc aggccctggg atgctgcatc tccaggcaac tatgcacttt cccggggaga
3001 gaaccagtat gagaagtggg ggcagggcac acattcatct ttgtaggaag gtctggcctg
3061 gggtcgggtg aaggagggcc caggtcagtt ctggggtccc agtgacctgc tttgccattc
3121 tcctggtgcc gctgctgctc cctgtttctg gagctggatg ttccccagct ggcagttgag
3181 ctgcctgagc caatgtgtct gtctttggta actgagtgaa ccataataaa ggggaacatt
3241 tggccctgtg aaaaaaaaaa aaaaaaaaaa aaaaaa
//