LOCUS BC024648 604 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphohistidine phosphatase 1, mRNA (cDNA clone
MGC:24855 IMAGE:4934238), complete cds.
ACCESSION BC024648
VERSION BC024648.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 604)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 604)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475860.
FEATURES Location/Qualifiers
source 1..604
/db_xref="H-InvDB:HIT000039826"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24855 IMAGE:4934238"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..604
/gene="PHPT1"
/gene_synonym="bA216L13.10"
/gene_synonym="CGI-202"
/gene_synonym="DKFZp564M173"
/gene_synonym="HSPC141"
/gene_synonym="PHP14"
/gene_synonym="RP11-216L13.10"
/db_xref="GeneID:29085"
/db_xref="HGNC:HGNC:30033"
/db_xref="MIM:610167"
CDS 22..399
/gene="PHPT1"
/gene_synonym="bA216L13.10"
/gene_synonym="CGI-202"
/gene_synonym="DKFZp564M173"
/gene_synonym="HSPC141"
/gene_synonym="PHP14"
/gene_synonym="RP11-216L13.10"
/codon_start=1
/product="phosphohistidine phosphatase 1"
/protein_id="AAH24648.1"
/db_xref="GeneID:29085"
/db_xref="HGNC:HGNC:30033"
/db_xref="MIM:610167"
/translation="MAVADLALIPDVDIDSDGVFKYVLIRVHSAPRSGAPAAESKEIV
RGYKWAEYHADIYDKVSGDMQKQGCDCECLGGGRISHQSQDKKIHVYGYSMAYGPAQH
AISTEKIKAKYPDYEVTWANDGY"
BASE COUNT 145 a 182 c 171 g 106 t
ORIGIN
1 ggggactccg ggaggaggaa catggcggtg gcggacctcg ctctcattcc tgatgtggac
61 atcgactccg acggcgtctt caagtatgtg ctgatccgag tccactcggc tccccgctcc
121 ggggctccgg ctgcagagag caaggagatc gtgcgcggct acaagtgggc tgagtaccat
181 gcggacatct acgacaaagt gtcgggcgac atgcagaagc aaggctgcga ctgtgagtgt
241 ctgggcggcg ggcgcatctc ccaccagagt caggacaaga agattcacgt gtacggctat
301 tccatggcct atggtcctgc ccagcacgcc atttcaactg agaaaatcaa agccaagtac
361 cccgactacg aggtcacctg ggctaacgac ggctactgag cactcccagc ccggggcctg
421 ctgcctccag cagccacttc agagcccccg cctttgcctg cactcctctt gcagggctgg
481 ccctgcctgc tcctgcggca gcctctggtg acgtgctgtc caccaggcct tggagacagg
541 ctagcctggc cacagaatta aacgtgttgc cacaaaaaaa aaaaaaaaaa aaaaaaaaaa
601 aaaa
//