LOCUS BC024327 929 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CDC42 effector protein (Rho GTPase binding) 5, mRNA
(cDNA clone MGC:21945 IMAGE:4390710), complete cds.
ACCESSION BC024327
VERSION BC024327.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 929)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 929)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089965.
FEATURES Location/Qualifiers
source 1..929
/db_xref="H-InvDB:HIT000039822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21945 IMAGE:4390710"
/tissue_type="Bone, osteosarcoma"
/clone_lib="NIH_MGC_86"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..929
/gene="CDC42EP5"
/gene_synonym="Borg3"
/gene_synonym="CEP5"
/gene_synonym="MGC21945"
/db_xref="GeneID:148170"
/db_xref="HGNC:HGNC:17408"
/db_xref="MIM:609171"
CDS 340..786
/gene="CDC42EP5"
/gene_synonym="Borg3"
/gene_synonym="CEP5"
/gene_synonym="MGC21945"
/codon_start=1
/product="CDC42 effector protein (Rho GTPase binding) 5"
/protein_id="AAH24327.1"
/db_xref="GeneID:148170"
/db_xref="HGNC:HGNC:17408"
/db_xref="MIM:609171"
/translation="MPVLKQLGPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFG
DTSFLSRHGGGPPPQPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDA
VLGVMDAARPEAAAAKPDAEPRPGTQPPQARCRPNADLELNDVIGL"
BASE COUNT 187 a 333 c 288 g 121 t
ORIGIN
1 cgcccagagg ggcctcagct tttccaccac tgctttctag tcctttaact cctagaggca
61 aacttttggg ggataagaaa gcctgggagg ggcctgtgcc aaaaccctct ctgcctgggg
121 actgggcggt gattccgctt ctgcctgggc tcctgccatg gcccccgaga ggggctgaca
181 ctttagctcc cggtgcaggt gagaacccgc ccggaggaag aaggaaggcg cgggccgggg
241 attaggagac ggaggcggac tcggagccag ggaaccaggg gtccgggcta gagctggagt
301 cgtgagcgcg cgcccgcccc gctctgggag gaccgcgaga tgcccgtgct gaagcagctg
361 ggccccgcgc agcccaagaa gcggcctgat cgcggcgccc tgtccatctc cgcgccgctc
421 ggcgacttcc ggcacacgct gcacgtgggg cgcggcggcg acgccttcgg ggacacctcg
481 ttcctgagcc gccacggcgg cgggccgccc ccccagcccc gggcgccccc cgcgggggcc
541 ccgcgctccc cgccgccgcc cgccgtcccg cagtccgcag cgccctcgcc tgccgacccg
601 ctgctgtcct tccacctgga tctggggccc tccatgctgg acgcggtgct gggcgtcatg
661 gacgcggcgc gcccggaggc ggctgccgcc aagcccgacg cggaaccccg ccccgggacg
721 cagccccccc aggcccgctg ccgccccaac gcggacctcg agctgaacga cgtcatcggc
781 ctctaggttc cctcattccc cgcgcccttc ccgcccggca ccccacttct gtatacataa
841 acggccaagg tgtgtgcccg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaagaaaaaa aaaaaaaaaa aaaaaaaaa
//