LOCUS BC024297 1138 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens jerky homolog (mouse), mRNA (cDNA clone
IMAGE:4301323), with apparent retained intron.
ACCESSION BC024297
VERSION BC024297.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1138)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1138)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1138
/db_xref="H-InvDB:HIT000090930"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4301323"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 257 a 281 c 331 g 269 t
ORIGIN
1 ggcccactgg ccatggctgg gccctatcgc agagagcctg tcagcacggc catttccaca
61 cccaggctgg ctgggaagca agctacgagg tgctcaaagg ccctctatgt ctgcaggtag
121 ccccgtccca cacaggcgag gatcgttggg cctccttagt agccaaagga actgaggtcc
181 agagcaggga atgtgttgcc cagtgtcagc atggtctgct ctggggtcag gcgtcttgcc
241 ctggtcctaa gccaccccaa gccaaggcat gtccctgggc ccatttcctc tctcgaggtc
301 ttgggttccc tatttctgat gtgtgtgaaa ggaaggcctg tcctctgggg tgaccatgag
361 gctcagtggg aggagctgcc aggcttgagc tgggacttgg cacctggcca gccttttttc
421 tatttcattg taccttgatg ggctgtcagt tctgaagaga aaaaatacac taggaatcca
481 ttcttcctcc accattctcc ctggcagagg gaagtgacta cacccctatg gtgtggacat
541 actgacgctc ctccatgaag cagcaaagtt ctgttgtttc aggagactgt gggccttgag
601 gatgtggtag tgacctcacc agaggagttg gcaattccta agtgctgcct ggaggcctct
661 acagagacat aatgttggag aacttctgcc acatggcagt gctgggtaag acccctctgt
721 ccccaccagt gcccttgagg ttatgggtgt tggtaggtct gtggcctcca tctccatgac
781 gatggtgtta aggactgcat gtttgtgtcc ccccccaaag tttatatgtt gaaaccctga
841 cccccaggag ggtggtatta ggaggtgggg cctttgggag gtgactaggc ttaggtgaga
901 tcgtgagggt ggggctcgcc gatgagatcg agtccttata agaaaaggaa ggaactagag
961 cgaggtcact ttgtgctgtg tgagcataca agaaaactgc catcttcaag ctgggtgcag
1021 tggctcacgc ctgtaatccc agcactggaa ggccaaggca ttaggattgc atgagtccag
1081 gagttcgaga ccagcctagg catgataaga ccttattgct aaaaaaaaaa aaaaaaaa
//