LOCUS BC024295 2143 bp mRNA linear HUM 20-JUL-2004
DEFINITION Homo sapiens sterile alpha motif domain containing 11, mRNA (cDNA
clone MGC:39333 IMAGE:3354502), complete cds.
ACCESSION BC024295
VERSION BC024295.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2143)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2143)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC024295.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: a Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749012.
FEATURES Location/Qualifiers
source 1..2143
/db_xref="H-InvDB:HIT000039813"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39333 IMAGE:3354502"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2143
/gene="SAMD11"
/gene_synonym="MGC45873"
/db_xref="GeneID:148398"
CDS 259..1701
/gene="SAMD11"
/gene_synonym="MGC45873"
/codon_start=1
/product="SAMD11 protein"
/protein_id="AAH24295.1"
/db_xref="GeneID:148398"
/translation="MAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSHDLLRVRQEVA
AAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLLSPQN
APHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQELLRKQNLARLELPAD
LLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLNHGAAPLLALPPQGPPGSG
PPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQDGSEDEPPKDSDGEDPETA
AVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSPYFHTGAVGGLSMDGEEAP
APEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPLLTEEHLLTNMGLKLGP
ALKIRAQVARRLGRVFYVASFPVALPLQPPTLRAPERELGTGEQPLSPTTATSPYGGG
HALAGQTSPKQENGTLALLPGAPDPSQPLC"
BASE COUNT 397 a 739 c 688 g 319 t
ORIGIN
1 gtcctgcagc caggacggca accttcccac cctcatatcc agcgtccacc gcagccgcca
61 cctcgttatg cccgagcatc agagccgctt gaattccaga gaggcagcct ggagattggc
121 ctgcgacccg ccggtgacct gttgggcaag aggctgggcc gctccccccg tatcagcagc
181 gactgctttt cagagaagag ggcacgaagc gaatcgcctc aagaggcgct gctgctgccg
241 cgggagctgg ggcccagcat ggccccggag gaccattacc gccggcttgt gtcagcactg
301 agcgaggcca gcacctttga ggaccctcag cgcctctacc acctgggcct ccccagccac
361 gatctcctga gggtccggca ggaggtggcg gctgcagctc tgaggggccc cagtggcctg
421 gaagcccacc tgccctcctc cacggcaggt cagcgtcgga agcagggcct ggctcagcac
481 cgggagggcg ccgccccagc tgccgccccg tccttctcgg agagggagct gcctcagccg
541 ccccccttgc tgtcgccgca gaatgcccct cacgtcgccc tgggccccca tctcaggccc
601 cccttcctgg gggtgccctc ggctctgtgc cagaccccag gctacggctt cctgcccccc
661 gcgcaggcgg agatgttcgc ccggcagcag gagctcctgc ggaagcagaa cctggcccgg
721 ctggagctgc ccgccgacct cctgcggcag aaggagctgg agagcgcgcg cccacagctg
781 ctggcgcccg agaccgccct gcgccccaac gacggcgccg aggagctgca gcggcgcggg
841 gccctgctgg tgctgaacca cggcgcggcg ccactgctgg ccctgccccc ccaggggccc
901 ccgggctccg gaccccccac cccgtcccgg gactctgccc ggcgagcccc ccggaagggg
961 ggtcccggcc ctgcctcagc gcggcccagc gagtccaagg agatgacggg ggctaggctc
1021 tgggcacaag atggctcgga agacgagccc cccaaagact cggacggaga ggaccccgag
1081 acggcagctg ttgggtgcag ggggcccact ccgggccaag ctccagctgg aggggccggc
1141 gccgagggga aggggctttt cccagggtcc acactgcccc tgggcttccc ttatgccgtc
1201 agcccctact tccacacagg cgcggtaggg ggactctcca tggatgggga ggaggcccca
1261 gcccctgagg acgtcaccaa gtggaccgtg gatgacgtct gcagcttcgt ggggggcctg
1321 tctggctgtg gagagtacac tcgggtcttc agggagcagg ggatcgacgg ggagaccctg
1381 ccactgctga cggaggagca cctgctgacc aacatggggc tgaagctggg gcccgccctc
1441 aagatccggg cccaggtggc caggcgcctg ggccgagttt tctacgtggc cagcttcccc
1501 gtggctctgc cactgcagcc accaaccctg cgggccccgg agcgagaact cggcacagga
1561 gagcagccct tgtcccccac gacggccacg tccccctatg gagggggcca cgcccttgcc
1621 ggtcaaactt cacccaagca ggagaatggg accttggctc tacttccagg ggcccccgac
1681 ccttcccagc ctctgtgttg aggttgccgg gggtaggggt ggggccacac aaatctccag
1741 gagccaccac tcaacacaat ggccctgcct cccaccgctt tatttctttc ggtttcggat
1801 gcaaaacaaa aaattttaaa agaaaatgtg acttcaaagg aaaagaacaa atttccaaag
1861 acttggggga gtgaaggcag agcctggtgc agatggacga ggtctgcaga cggagggcag
1921 aggtggtgga aggggccagg ggcctgcagg cctccccctg gaactgggac tggtctcggt
1981 ctgctgacgt cagggtcagc tcccccgcgg agctgacttc agcagcccac agctgtgggg
2041 cttcagcagc cacaccagcc cagcccagcc cagctctcga tacgtttggt ctttcatgct
2101 gaaaaataaa taataaagcc tgaaaaaaaa aaaaaaaaaa aaa
//