LOCUS BC024273 1924 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 28, mRNA (cDNA clone MGC:39160 IMAGE:4130937), complete cds. ACCESSION BC024273 VERSION BC024273.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1924) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1924) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: c Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20336295. FEATURES Location/Qualifiers source 1..1924 /db_xref="H-InvDB:HIT000039802" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39160 IMAGE:4130937" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1924 /gene="DDX28" /gene_synonym="FLJ11282" /gene_synonym="MDDX28" /db_xref="GeneID:55794" /db_xref="HGNC:HGNC:17330" /db_xref="MIM:607618" CDS 8..1630 /gene="DDX28" /gene_synonym="FLJ11282" /gene_synonym="MDDX28" /codon_start=1 /product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 28" /protein_id="AAH24273.1" /db_xref="GeneID:55794" /db_xref="HGNC:HGNC:17330" /db_xref="MIM:607618" /translation="MALARPVRLFSLVTRLLLAPRRGLTVRSPDEPLPVVRIPVALQR QLEQRQSRRRNLPRPVLVRPGPLLVSARRPELNQPARLTLGRWERAPLASQGWKSRRA RRDHFSIERAQQEAPAVRKLSSKGSFADLGLEPRVLHALQEAAPEVVQPTTVQSSTIP SLLRGRHVVCAAETGSGKTLSYLLPLLQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQ VRAVAQPLGRSLGLLVRDLEGGHGMRRIRLQLSRQPSADVLVATPGALWKALKSRLIS LEQLSFLVLDEADTLLDESFLELVDYILEKSHIAEGPADLEDPFNPKAQLVLVGATFP EGVGQLLNKVASPDAVTTITSSKLHCIMPHVKQTFLRLKGADKVAELVHILKHRDRAE RTGPSGTVLVFCNSSSTVNWLGYILDDHKIQHLRLQGQMPALMRVGIFQSFQKSSRDI LLCTDIASRGLDSTGVELVVNYDFPPTLQDYIHRAGRVGRVGSEVPGTVISFVTHPWD VSLVQKIELAARRRRSLPGLASSVKEPLPQAT" BASE COUNT 414 a 539 c 565 g 406 t ORIGIN 1 gggaaacatg gctctagcgc ggccggtgcg gctcttttcc ctcgtgactc ggttgctcct 61 ggcgccgcga cggggcctca cggtccgcag tcccgacgaa cccctgccgg tggtgcgcat 121 cccagtggct ctacagcggc agttggaaca gcggcagagc aggcggcgga acctcccgag 181 gccggtgctg gttcgacccg gaccgctgct ggtttcggcg cggcggccgg agttgaacca 241 gccggcgcgc ctcacactgg gccgttggga gcgcgcgccg ctagcctctc aaggctggaa 301 gagtcgacgc gcgcgtcggg accacttctc catcgagcgc gcgcaacagg aggcgccagc 361 ggtgcgaaag ctctcgtcta agggcagctt tgctgacctg ggcctggagc cccgtgtgct 421 gcacgcacta caggaggctg cgcctgaagt cgttcagccc acaaccgtgc agtctagcac 481 catcccctca ctacttcgcg gccgccatgt cgtttgcgcc gcagaaaccg gcagtggcaa 541 gactctcagc tacctcctgc cgctgcttca acggctcttg ggccagccaa gcctggactc 601 ccttcctatc cccgcgcccc gaggcctggt ccttgttcct tcccgagaat tggcccaaca 661 ggtgcgggct gtggcccaac ccttgggccg ctccttgggc ctgctggtgc gggacctgga 721 gggaggccac ggcatgcgta ggatcaggct gcagctgtcc agacagcctt cagcagatgt 781 gcttgtggcc actccagggg ctctgtggaa ggccctgaaa agtcgactga tcagtctgga 841 gcaactctcc ttcttggtgt tggatgaggc agacacactg ctggatgaaa gcttcctgga 901 actggtggac tacatcttag agaagagcca catagcagaa ggcccagctg acttggaaga 961 ccccttcaat cccaaagctc agttagtgct ggtaggagcc acatttcccg aaggtgtagg 1021 ccagttgctg aataaagtcg ccagcccaga tgctgtcacc accatcacca gctccaagct 1081 ccactgtatc atgcctcatg tgaaacagac atttctgaga ctgaagggag cagataaggt 1141 ggccgagctg gtgcacatcc tcaagcatcg tgacagagca gaaaggactg gtccctcagg 1201 aactgttctg gtgttctgta atagctccag cactgtgaac tggctgggat atattctgga 1261 tgaccacaaa atccaacacc taaggttgca ggggcaaatg ccagccttga tgagggtagg 1321 aatcttccag tccttccaga agagctcccg agacatactt ctctgcacag acatagcctc 1381 tcggggcctg gacagcactg gtgtggagct ggttgtcaat tatgatttcc ccccaacgct 1441 gcaagattac atccacagag cagggagagt gggccgtgtg gggagcgagg tgccaggcac 1501 cgtcatcagt tttgtgaccc atccctggga tgtgagcctg gttcagaaga ttgagctggc 1561 ggctcgccga aggagaagtc ttccaggact agcatcctcg gtgaaagagc ctttgcccca 1621 agcaacctga ttttgacaaa tctgattaaa atgtgatgct agaacaggga tctttcccag 1681 tatcttgagt gggtgaccac acttgtcagt gggaggctct gggctgccct gtcggctcct 1741 tgagggcggg atgaactgct ttgtgacttg gaaaggtacg ctgctggcca gcattggaga 1801 agaagctgct gagcatggct ttctgtagtc tttagcaaga cacaagtgga ttttgacttt 1861 gtatcatgtc atgatttcta acaataaatg atgtttttat gtgaaaaaaa aaaaaaaaaa 1921 aaaa //