LOCUS BC024244 1523 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens splA/ryanodine receptor domain and SOCS box containing
3, mRNA (cDNA clone MGC:33319 IMAGE:4798873), complete cds.
ACCESSION BC024244
VERSION BC024244.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1523)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1523)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: b Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679885.
FEATURES Location/Qualifiers
source 1..1523
/db_xref="H-InvDB:HIT000258972"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33319 IMAGE:4798873"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1523
/gene="SPSB3"
/gene_synonym="SSB3"
/db_xref="GeneID:90864"
/db_xref="HGNC:HGNC:30629"
CDS 56..1123
/gene="SPSB3"
/gene_synonym="SSB3"
/codon_start=1
/product="splA/ryanodine receptor domain and SOCS box
containing 3"
/protein_id="AAH24244.1"
/db_xref="GeneID:90864"
/db_xref="HGNC:HGNC:30629"
/translation="MARRPRNSRAWHFVLSAARRDADARAVALAGSTNWGYDSDGQHS
DSDSDPEYSTLPPSIPSAVPVTGESFCDCAGQSEASFCSSLHSAHRGRDCRCGEEDEY
FDWVWDDLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHFWEIKMTSPVY
GTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGS
IIGVHLDTWHGTLTFFKNRKCIGVAATKLQNKRFYPMVCSTAARSSMKVTRSCASATS
LQYLCCHRLRQLRPDSGDTLEGLPLPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAA
TSAHHSSREPRPCQRKRCRRT"
BASE COUNT 283 a 494 c 472 g 274 t
ORIGIN
1 agcggggggg ccgggccggc ggagcgcgca gcgggggctg cagattcttt ccaccatggc
61 cagacgcccc cggaacagca gggcctggca cttcgtcctg agtgcagccc gccgagacgc
121 agatgcccgg gccgtggctc tagcaggctc cactaactgg ggctacgact ctgatgggca
181 gcacagcgac tcggactccg accccgagta ctccacgctg ccgccatcca tccccagtgc
241 ggtgcccgtg accggcgagt ccttctgtga ctgtgctggg cagagcgagg cctccttctg
301 tagcagcctg cactcggccc accggggcag ggactgccgc tgcggagagg aagacgagta
361 tttcgactgg gtctgggatg acttaaataa gtcatcagcc accctgctga gctgtgacaa
421 ccgtaaggtc agcttccaca tggagtacag ctgcggcaca gcggccatcc ggggcaccaa
481 ggagctgggg gagggccagc acttctggga gatcaagatg acctctcccg tctacggcac
541 cgacatgatg gtgggcatcg ggacgtcgga tgtggacctg gacaaatacc gccacacgtt
601 ctgcagcctg ctgggcaggg atgaggacag ctggggcctc tcctacacgg gcctcctcca
661 ccacaagggc gacaagacca gcttctcgtc gcggttcggc cagggctcca tcattggcgt
721 gcacctggac acctggcacg gcacactcac ctttttcaag aacaggaagt gtataggtgt
781 ggcagccacc aagctgcaga acaagagatt ctacccgatg gtgtgctcca cggcggcccg
841 gagcagcatg aaggtcaccc gctcctgtgc cagcgccact tccctccagt acctgtgctg
901 ccaccgcctg cgccagctgc ggccagactc gggagacacg ctggagggtc tgccgctgcc
961 gccgggcctc aagcaggtgc tacacaacaa gctgggctgg gtcctgagca tgagttgcag
1021 ccgccgcaag gctccagtgt ccgatcccca ggcagcgacc tccgcccacc acagcagtcg
1081 cgagcctcgg ccctgccaga ggaagcgctg ccgccggacc tgactgactt cccagtggaa
1141 ctgccttctt gggctgggac agcccctttc ctctgtccct tctttctctg tcccttcctt
1201 ccagccacac tccagggcgg agttggatga ggcccgtccg gagggagcca tctcttgctc
1261 ccgaggctgg gacagtcctt tctgtggggg ctctagggcc cctctgctgc tgtgctgggt
1321 ggggaagcgg ctgccctgag ccccaggtct tgtgggaggc tgcgaggacg agagcctggc
1381 tggagcccgc gttgctgttc ccacagggcc tcggtttttc ctaacttgct ctgcatgctg
1441 tcagcggctg ccccgccgtc atagacttaa aggactgcaa taaatgtaga gttgatgtct
1501 aacacccaaa aaaaaaaaaa aaa
//