LOCUS BC024203 3634 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens suppressor of Ty 5 homolog (S. cerevisiae), mRNA (cDNA
clone MGC:3826 IMAGE:3532191), complete cds.
ACCESSION BC024203
VERSION BC024203.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3634)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3634)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC024203.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149523.
FEATURES Location/Qualifiers
source 1..3634
/db_xref="H-InvDB:HIT000039768"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3826 IMAGE:3532191"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3634
/gene="SUPT5H"
/gene_synonym="SPT5"
/gene_synonym="SPT5H"
/db_xref="GeneID:6829"
/db_xref="HGNC:HGNC:11469"
/db_xref="MIM:602102"
CDS 37..3300
/gene="SUPT5H"
/gene_synonym="SPT5"
/gene_synonym="SPT5H"
/codon_start=1
/product="suppressor of Ty 5 homolog (S. cerevisiae)"
/protein_id="AAH24203.1"
/db_xref="GeneID:6829"
/db_xref="HGNC:HGNC:11469"
/db_xref="MIM:602102"
/translation="MSDSEDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPED
EEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEK
EEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDE
LSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAP
EHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPK
SWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKR
PPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSE
LEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITI
MPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTM
HELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGK
VVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFL
HCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRG
GFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC
QTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSR
TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPN
PQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQV
APSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGI
EQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHL
EPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA"
BASE COUNT 914 a 989 c 1073 g 658 t
ORIGIN
1 gaaggcggag gtggagcccg agagcagcag cggaagatgt cggacagcga ggacagcaac
61 ttttccgagg aggaggacag cgagcgcagc agtgacggcg aggaggccga ggtagacgaa
121 gagcggcgga gtgcagcggg cagtgagaaa gaagaagagc ctgaggacga agaggaggag
181 gaagaggagg aggaatatga tgaggaagag gaagaagaag atgatgaccg accccccaag
241 aaaccccgcc atggaggctt cattctggac gaggctgatg ttgacgatga gtatgaggac
301 gaggaccagt gggaggatgg agcagaggac attctagaga aagaagagat tgaagcctcc
361 aatatcgata atgttgtcct ggatgaagat cgttctgggg ctcgccgcct gcaaaacctc
421 tggagggacc agcgagaaga agaactgggc gagtattaca tgaagaaata cgccaagtca
481 tctgtgggag agacggtgta tggaggatct gatgagctct cagacgacat cacccagcag
541 cagctgctcc caggagtcaa ggatcccaat ctgtggactg tcaaatgtaa gattggggag
601 gaacgggcca cggccatttc cttgatgcgc aagttcattg cctaccagtt cacagacacg
661 cccctgcaga tcaagtcagt agtggcacca gagcatgtga agggctacat ctacgtggag
721 gcctacaagc agacccacgt gaagcaggcc attgaggggg tgggcaacct gcggcttggc
781 tactggaacc agcagatggt gcccatcaag gagatgacag acgtgctcaa agtggtgaag
841 gaggtggcca acctgaaacc aaagtcctgg gtccgcctca agcggggcat ctacaaggat
901 gacattgctc aggtggacta cgtggagccc agccagaaca ccatctccct gaagatgatc
961 ccacgcatcg actacgatcg catcaaggcc cgcatgagct tgaaagactg gtttgccaaa
1021 aggaagaagt ttaagcggcc tccacagagg ctgtttgatg ctgagaagat caggtccctg
1081 gggggtgatg ttgcctctga tggtgacttc ctcatctttg aggggaaccg ttacagccgg
1141 aagggctttc tgttcaagag cttcgccatg tctgctgtga tcacggaggg tgtgaagcca
1201 acactctctg agctggaaaa gtttgaggac cagccagagg gcattgacct ggaggtggtg
1261 actgagagca cagggaagga gcgggagcac aacttccaac ctggggacaa cgtggaggtc
1321 tgtgagggtg agctcatcaa cctgcagggc aagatcctca gcgtggatgg caacaagatc
1381 accatcatgc ccaagcatga ggacctcaag gacatgttgg agttcccagc ccaggaactt
1441 agaaaatact tcaagatggg ggaccacgtg aaggtgattg ctggccgatt cgagggcgac
1501 acaggcctca ttgtgcgggt ggaggagaat ttcgttatcc tgttctctga cctcaccatg
1561 catgagctga aggtgctccc ccgggacctg cagctctgct cagagacagc atcaggtgtg
1621 gatgttgggg gccagcatga atggggcgag ctggtgcagc tggatcccca gactgtgggt
1681 gtcatcgtgc gactagaacg ggagaccttc caggtgctga acatgtacgg gaaggtggtg
1741 actgtcagac atcaggctgt gacccggaag aaggacaacc gctttgctgt ggccttggac
1801 tcagagcaga acaacatcca tgtgaaagac atcgttaagg tcattgatgg cccccactca
1861 ggccgagaag gggagattcg ccatctcttc cgaagcttcg ccttcctaca ttgcaagaaa
1921 ctggtggaga acgggggcat gtttgtctgc aagacccgcc acctggtgct ggctgggggc
1981 tcaaagcccc gtgatgtgac caacttcacc gtgggtggct ttgcgcctat gagtccccgg
2041 atcagcagcc ccatgcaccc cagtgctgga ggtcagcgtg gcggctttgg tagcccaggt
2101 ggcggcagtg gtggcatgag caggggccgg ggccggaggg acaacgaact catcggccag
2161 accgtgcgca tctcccaggg gccctacaaa ggctacatcg gtgtggtgaa agatgccaca
2221 gagtccacgg cccgtgtgga gctgcactcc acctgccaga ccatctctgt ggaccgtcag
2281 cggctcacca cggtgggctc acggcgcccg ggcggcatga cctcgaccta tgggaggacg
2341 cccatgtatg gctcccagac gcccatgtat ggctctggct cccgaacacc catgtacggc
2401 tcacagacac ccctccagga tggtagccgc accccacact acggctcaca gacgcccctg
2461 catgatggca gccgcactcc tgcccagagt ggggcctggg accccaacaa ccccaacacg
2521 ccgtcacggg ctgaggaaga atatgagtat gctttcgatg atgagcccac cccgtccccg
2581 caggcctatg ggggaacccc caatccccaa acacctggct acccagaccc ctcgtcccca
2641 caggtcaacc cacaatacaa cccgcagacg ccagggacgc cggccatgta caacacagac
2701 cagttctctc cctatgctgc cccctcccca caaggttcct accagcccag ccccagcccc
2761 cagagctacc accaggtggc gccaagccca gcaggctacc agaataccca ctccccagcc
2821 agctaccacc ctacaccgtc gcccatggcc tatcaggcta gccccagccc gagccccgtt
2881 ggctacagtc ctatgacacc tggagctccc tcccctggtg gctacaaccc acacacgcca
2941 ggctcaggca tcgagcagaa ctccagcgac tgggtaacca ctgacattca ggtgaaggtg
3001 cgggacacct acctggatac acaggtggtg ggacagacag gtgtcatccg cagtgtcacg
3061 gggggcatgt gctctgtgta cctgaaggac agtgagaagg ttgtcagcat ttccagtgag
3121 cacctggagc ctatcacccc caccaagaac aacaaggtga aagtgatcct gggcgaggat
3181 cgggaagcca cgggcgtcct actgagcatt gatggtgagg atggcattgt ccgtatggac
3241 cttgatgagc agctcaagat cctcaacctc cgcttcctgg ggaagctcct ggaagcctga
3301 agcaggcagg gccggtggac ttcgtcggat gaagagtgat cctccttcct tccctggccc
3361 ttggctgtga cacaagatcc tcctgcaggg ctaggcggat tgttctggat ttccttttgt
3421 ttttcctttt agttttccat cttttccctc cctggtgctc attggaatct gagtagagtc
3481 tgggggaggg tccccacctt cctgtacctc ctccccacag cttgcttttg ttgtaccgtc
3541 tttcaataaa aagaagctgt ttggtctaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//