LOCUS BC024189 1395 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens fibronectin type III and ankyrin repeat domains 1,
mRNA (cDNA clone MGC:26734 IMAGE:4826296), complete cds.
ACCESSION BC024189
VERSION BC024189.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1395)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1395)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC024189.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222185.
FEATURES Location/Qualifiers
source 1..1395
/db_xref="H-InvDB:HIT000039759"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26734 IMAGE:4826296"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1395
/gene="FANK1"
/gene_synonym="HSD13"
/db_xref="GeneID:92565"
/db_xref="HGNC:HGNC:23527"
CDS 105..1142
/gene="FANK1"
/gene_synonym="HSD13"
/codon_start=1
/product="fibronectin type III and ankyrin repeat domains
1"
/protein_id="AAH24189.2"
/db_xref="GeneID:92565"
/db_xref="HGNC:HGNC:23527"
/translation="MEPQRIMPPSKPHPPVVGKVTHHSIELYWDLEKKAKRQGPQEQW
FRFSIEEEDPKMHTYGIIYTGYATKHVVEGLEPRTLYRFRLKVTSPSGECEYSPLVSV
STTREPISSEHLHRAVSVNDEDLLVRILQGGRVKVDVPNKFGFTALMVAAQKGYTRLV
KILVSNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRRHGASWQARDLGGCTALHWAA
DGGHCSVIEWMIKDGCEVDVVDTGSGWTPLMRVSAVSGNQRVASLLIDAGANVNVKDR
NGKTPLMVAVLNNHEELVQLLLDKGADASVKNEFGKGVLEMARVFDRQSVVSLLEERK
KKQRPKKSCVC"
BASE COUNT 452 a 272 c 367 g 304 t
ORIGIN
1 catttcgcct ccgggttgtc agggcaaccg tagcgacgcc ggccctggct gagaggcgtt
61 aggagtccgg gggttcgccc gcggaggccg gggagcagcc gaccatggag ccccagagaa
121 tcatgccacc ctcaaagcct catccacctg tcgtgggcaa agtgactcat cacagcattg
181 aattatactg ggatctggaa aagaaagcca aacgccaagg acctcaagag cagtggttca
241 ggttctcgat tgaagaagaa gaccccaaaa tgcacactta tggtatcatt tatacgggat
301 atgcaacgaa gcatgttgtt gaaggtctgg aaccaaggac gctgtacaga tttcgcctga
361 aggtcaccag cccctctggg gagtgtgagt acagcccact cgtctcagtg tctacaacca
421 gagagcccat aagtagtgag cacttgcacc gggctgtcag tgtgaatgat gaagatttgc
481 tggtccgaat acttcaagga ggccgtgtta aggttgatgt tcccaataag tttggcttta
541 ccgctctgat ggttgctgcc cagaaaggat acaccaggct tgtgaaaatc ctagtttcta
601 atggcacaga cgtgaatctg aagaatggaa gtggcaagga cagtctaatg ctggcgtgct
661 atgcgggaca cctagatgtt gtgaaatatc tccgaagaca tggcgcttct tggcaggcta
721 gagacctggg aggctgtaca gctctgcact gggctgcaga tggaggccac tgcagtgtga
781 ttgagtggat gataaaggat ggctgtgagg tagacgtcgt ggacactggt tcaggatgga
841 ccccactcat gagagtctct gcggtgtcgg gaaatcagag ggtggcctct cttctaattg
901 atgctggggc caatgtgaat gtgaaggaca gaaatggaaa gacgcccctt atggtggctg
961 tgttaaataa tcatgaagag ttagttcagt tacttcttga caaaggggca gatgcaagtg
1021 taaaaaatga gttcggcaaa ggtgtcctag aaatggccag agtttttgac agacagagtg
1081 tagtctcctt attagaagaa aggaaaaaaa agcagaggcc aaagaagtct tgtgtctgct
1141 gatgagagca ccactcatct gcgaaacgca cgtaaaacaa agtgaaccgt gactgttaaa
1201 ctagggatgg gaaattctgc atcttggggg gctgtacatt tatttattta gttgaagatt
1261 cactgatccc actttgaaat acatcttttt acctaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaa
//