LOCUS BC024188 1382 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 3 open reading frame 38, mRNA (cDNA clone
MGC:26717 IMAGE:4824439), complete cds.
ACCESSION BC024188
VERSION BC024188.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1382)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1382)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC024188.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222236.
FEATURES Location/Qualifiers
source 1..1382
/db_xref="H-InvDB:HIT000039758"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26717 IMAGE:4824439"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1382
/gene="C3orf38"
/gene_synonym="MGC26717"
/db_xref="GeneID:285237"
/db_xref="HGNC:HGNC:28384"
CDS 102..1085
/gene="C3orf38"
/gene_synonym="MGC26717"
/codon_start=1
/product="chromosome 3 open reading frame 38"
/protein_id="AAH24188.1"
/db_xref="GeneID:285237"
/db_xref="HGNC:HGNC:28384"
/translation="MSGLSFSEMEGCRNLLGLLDNDEIMALCDTVTNRLVQPQDRQDA
VHAILAYSQSAEELLRRRKVHREVIFKYLATQGIVIPPATEKHNLIQHAKDYWQKQPQ
LKLKETPEPVTKTEDIHLFQQQVKEDKKAEKVDFRRLGEEFCHWFFGLLNSQNPFLGP
PQDEWGPQHFWHDVKLRFYYNTSEQNVMDYHGAEIVSLRLLSLVKEEFLFLSPNLDSH
GLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLKIMGE
SSLAPGTLPKPSVKFEQSDLEAFYNVITVCGTNEVRHNVKQASDSGTGDQV"
BASE COUNT 429 a 290 c 300 g 363 t
ORIGIN
1 aagaaaggca cttccggtgt ctgttgccag gcgcgggccc agtgggccgt aggggcgaca
61 ttgttgccgt cgtctttccc cccccagtcc cggggatgga gatgtcggga ctcagctttt
121 cagagatgga gggctgccgt aacctacttg gcctactgga caacgacgag atcatggccc
181 tatgcgacac cgtcaccaac cgcctggtgc agcctcagga ccgccaagat gctgttcatg
241 caatattagc atacagtcaa agtgcagaag aacttctgag gcgtagaaaa gtccaccgag
301 aagttatatt taagtacttg gcaacacagg ggattgttat acctccagct actgaaaaac
361 acaatcttat tcagcatgca aaagattact ggcaaaagca accacaactg aaattgaagg
421 aaacgccaga gccagttaca aagacagagg acatccacct atttcaacag caggtgaaag
481 aagataaaaa agctgaaaaa gttgattttc gtcgcctagg agaagaattc tgtcattggt
541 tctttggact tcttaattct cagaatcctt ttctaggacc acctcaagat gaatggggac
601 cacagcactt ctggcatgat gtgaagctta ggttttatta caacacatca gaacaaaatg
661 ttatggacta ccatggagca gaaatcgtga gccttcgttt gctgtcacta gtaaaagaag
721 aatttctttt tctcagcccc aacctagatt cacatggact gaaatgtgca tcttctcctc
781 atgggctggt tatggttgga gttgctggga ctgtccatcg aggaaacact tgtttgggca
841 tttttgaaca aatttttgga ctcatccgct gcccttttgt ggagaatact tggaaaatca
901 aatttatcaa cctgaaaatt atgggagaga gttcccttgc tcctggaaca ttaccgaaac
961 catctgttaa atttgaacaa agtgatctag aggcctttta taatgtaatc actgtatgtg
1021 gtaccaatga agtacgacat aatgtaaagc aggcttcgga tagtggaact ggggaccaag
1081 tttgaggtag tggaaatgag acattgctga acaaaagaga actgggttta cctgaccctc
1141 taaagcgcta agtactgtca gcctgaaaaa aatcttctat acagaaactc ttccaaatac
1201 tatatcagta atgtctgaat gatttcagat gtgaaaattg acatatttta gttgaaatac
1261 ctttctggac tacagactta catatcatgt gaatacttac ctatttctac ccgagttgca
1321 gcaagtattc tgaaagctta atgcaaataa atcccacttt agatcctaaa aaaaaaaaaa
1381 aa
//