LOCUS BC024147 3824 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens G patch domain containing 8, mRNA (cDNA clone
IMAGE:3833127), partial cds.
ACCESSION BC024147
VERSION BC024147.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3824)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3824)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC024147.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: l Column: 15.
FEATURES Location/Qualifiers
source 1..3824
/db_xref="H-InvDB:HIT000090876"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3833127"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3824
/gene="GPATC8"
/db_xref="GeneID:23131"
/db_xref="HGNC:HGNC:29066"
CDS <1..1520
/gene="GPATC8"
/codon_start=3
/product="GPATC8 protein"
/protein_id="AAH24147.2"
/db_xref="GeneID:23131"
/db_xref="HGNC:HGNC:29066"
/translation="SPSQRSGSRKRSWGHESPEERHSGRRDFIRSKIYRSQSPHYFRS
GRGEGPGKKDDGRGDDSKATGPPSQNSNIGTGRGSEGDCSPEDKNSVTAKLLLEKIQS
RKVERKPSVSEEVQATPNKAGPKLKDPPQGYFGPKLPPSLGNKPVLPLIGKLPATRKP
NKKCEESGLERGEEQEQSETEEGPPGSSDALFGHQFPSEETTGPLLDPPPEESKSGEA
TADHPVAPLGTPAHSDCYPGDPTISHNYLPDPSDGDTLESLDSSSQPGPVESSLLPIA
PDLEHFPSYAPPSGDPSIESTDGAEDASLAPLESQPITFTPEEMEKYSKLQQAAQQHI
QQQLLAKQVKAFPASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAA
AIGIHPHPHPQPLAQVHHIPQPHLTPISLSHLTHSIIPGHPATFLASHPIHIIPASAI
HPGPFTFHPVPHAALYPTLLAPRPAAAAATALHLHPLLHPIFSGQDLQHPPSHGT"
BASE COUNT 980 a 1008 c 817 g 1019 t
ORIGIN
1 ggagcccttc ccagagatca ggctccagga agagatcatg gggtcacgag agccctgagg
61 agaggcattc tgggcgtcgg gacttcattc gttctaagat ctaccgctcc cagtcccccc
121 actatttccg atcaggccgg ggagaaggtc ctgggaagaa agatgatggc agaggagatg
181 acagtaaagc aacaggtcca ccttcccaga acagcaacat tggcacagga agagggtcag
241 aaggtgactg cagtcctgaa gacaagaact ctgtcactgc caaactgcta ctggagaaga
301 tccagtcaag gaaagtggag aggaaaccta gtgtgagtga ggaggtgcag gccaccccta
361 ataaagctgg gcccaagctc aaggaccccc cacaaggtta ctttgggccc aagctccccc
421 catctcttgg caataagcct gtccttccac tgatagggaa gctcccagct acccgaaagc
481 ccaataagaa gtgtgaagag tctggcttgg aaagggggga agagcaagaa cagtcagaga
541 cagaagaggg gcccccaggg agtagtgatg ccctatttgg gcatcagttc ccttcagagg
601 aaacaactgg ccccttatta gacccacccc cagaagagtc aaagtctgga gaagctactg
661 ctgatcaccc tgtggctcca ctaggcaccc cagcacattc tgactgctac cctggggacc
721 caaccatctc ccataactac ctccccgacc ccagtgatgg ggacaccctg gagtccctgg
781 atagcagcag tcagccaggc cctgtggagt ccagcttgct gcctatagca ccagaccttg
841 agcatttccc cagttatgca cctcccagtg gggatcctag tattgagtca acagatgggg
901 ctgaggatgc ttcactggcc cccctggaaa gccagcccat caccttcacc cctgaggaga
961 tggagaagta cagcaagctc cagcaggctg ctcagcaaca catccagcag cagcttctgg
1021 ccaagcaagt aaaggccttt ccagcctcag ctgccctggc cccagccaca ccagccctgc
1081 aacccatcca cattcagcag ccagctacag cctctgccac ctccatcaca actgttcagc
1141 atgccatcct acaacatcat gctgccgcag ctgctgccgc catcggcatt caccctcacc
1201 cccatcccca accacttgcc caggtgcatc atattcccca gccccatctg acccccattt
1261 ctttgtccca cctcactcac tcaatcatcc ctggccaccc tgccaccttt ctcgctagcc
1321 atcccatcca catcattccc gcctcagcca tccatcctgg gcccttcacc tttcaccctg
1381 tcccacatgc tgccctctac cccaccctac ttgctccacg gcctgctgca gcagctgcca
1441 ctgcacttca ccttcaccca ctacttcacc ccatcttctc aggtcaggac ctgcaacatc
1501 cccccagcca tggcacgtga gttgggggat gggatcctag gtagggccag gggaggagac
1561 ccataaatgt tcccttgggg gtgttgagcc attaatacca gcaagtagaa gctgggatgg
1621 gcagtgtctg acagccaaag aattgagttt tggcttgcag gggtgggttt agatttgaag
1681 tttgctttca gtttactatc agggatttct ttttcctgtc ctcctctcaa tttgtccctc
1741 cctcttctgt gtttctaagc tagggaacac cagtaagtgc tacccacccc tctgcagcaa
1801 catctccaaa ctgtcaagtt tagataatcc cctcctccct ctgctttttt cctctgctct
1861 tcccttctgt aaattttaaa acattttcct cccctctggc cagtgggttg tcaccagagc
1921 acttgctgtg ggcccatctg gtcttgcctt ctcagcgcca cagggaaggc caagctgttc
1981 tagtggtgga agtgccacca ttttggggta gtatctttga ccatctttgg tgacgttacg
2041 ttatcccagg tgaggtggaa agcgtctcac ctggaacctg atataactca ggctgcaatt
2101 ccatccagtt cccacatcaa cggagccaca catttggcac tgttatcttg gtatccctca
2161 tcccagaaga ggcatctcca tatcccagaa aagaagatcc tatcatgaat aaaagctgta
2221 tggcccagag aggagctcat gtgtctaaag tgaagggtat attttcttct gttgtgttga
2281 tgtttccttc ttaatttata ggattttttt aatgtaaaaa attgcactga actctataaa
2341 cgtaaatgct gctttttgta gctcatataa aaaaggttcc atatttgtag tatactgcaa
2401 taatattttt tacatccagc tctttaagtg atcctcgttc tggtggcttt gtgtaaatat
2461 gtttgcccta gttgaattaa gaaactctaa aggttataaa atgaaaacaa aaaataaaat
2521 atttgttttc tgctagatgc aaaactgact aagcatgtat attttaccaa acttatgtat
2581 tttttgaagt tatgaactat aaaatgttaa aacatttttt gctgggacaa aatgttaagt
2641 aatttgcagt atgtagtgcc cccagtattg ggatttttga gctaatgggc agcagtcagc
2701 tgggggcttc tgagggatgc tcatctttaa cagtctccct catgtacttt tgctgtttta
2761 cacagagaaa caggtagacc ccacagagga gaaggagggg attcaacagc tttattgtct
2821 ggaagcagtg agatttggtg attgtctggg gggattcctg ggtttccctg ggtaccttgt
2881 tccaggcagt cagtccattt gccttcctag tacttagccc cctctgacaa tttttttttt
2941 aatgtgcctt ttgggttggt agaaacggaa gtagaagtag gctggaggat gagttgggac
3001 agtcttcctt ttgttgggag gtgagcacat ttacagatat tttgcttcat agtttccatg
3061 ccctctgccc agctcagttt agacagtaaa cgttccttgt ttcttttctc ccatgacact
3121 gacaagagga attaccacct cagcctcttt tgcccctctt cttgcctttc acccaggctc
3181 tcagccctaa ttaacacact gacccaaagg tgcttgtgtt gcaggtccca tctcctttga
3241 tgaggttaac aattcccact ttggcatttt cctaactatt cgtgtggcta gaattggttg
3301 gttggtcact tgacaagaaa aaccatactt acctgggcca aggctctgtt cctgccttcg
3361 caaattctca aaagagtaaa gtttatgaaa agaaagtggc aggcaaacac aactcttgac
3421 tgccctccca ccctcctacc tgttcagtac tcatctgatt cagaagcatc acttcttgga
3481 taactagcac tggaaaaatg aaatcatctg tgtaagtgaa gggactcatt tttctttgct
3541 ttcagcccat gtaaataaat aatacagtat taacattttc gtgctgcttc ccattagctt
3601 gtagattgag ccatactctg gctgcctctt tgccttccta ggggcatttt ctttaacttc
3661 cagaatagtg attttaaaag taaaaataaa aataaacctt acttacaagc ataacagatt
3721 gtatttaact ttatcacata tgatagagat atatatgctg taaaatgagg gaaaggaact
3781 ttctaataaa ccaatgattt gtggaaaaaa aaaaaaaaaa aaaa
//