LOCUS BC024038 1544 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tubulin, beta 2C, mRNA (cDNA clone MGC:10845
IMAGE:3616531), complete cds.
ACCESSION BC024038
VERSION BC024038.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1544)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1544)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1544
/db_xref="H-InvDB:HIT000050877"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10845 IMAGE:3616531"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1544
/gene="TUBB2C"
/gene_synonym="TUBB2"
/db_xref="GeneID:10383"
/db_xref="HGNC:HGNC:20771"
/db_xref="MIM:602660"
CDS 39..1376
/gene="TUBB2C"
/gene_synonym="TUBB2"
/codon_start=1
/product="tubulin, beta 2C"
/protein_id="AAH24038.1"
/db_xref="GeneID:10383"
/db_xref="HGNC:HGNC:20771"
/db_xref="MIM:602660"
/translation="MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL
ERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR
GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQ
NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRK
AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQHYQDATAEEEGEFEEEAEEEVA"
BASE COUNT 345 a 458 c 447 g 294 t
ORIGIN
1 ctacttcctc ctgcttcccc gccgccgccg ccgccatcat gagggaaatc gtgcacttgc
61 aggccgggca gtgcggcaac caaatcggcg ccaagttttg ggaggtgatc agcgatgagc
121 acggcatcga ccccacgggc acctaccacg gggacagcga cctgcagctg gaacgcatca
181 acgtgtacta caatgaggcc accggcggca agtacgtgcc ccgcgccgtg ctcgtggatc
241 tggagcccgg caccatggac tccgtgcgct cggggccctt cgggcagatc ttccggccgg
301 acaacttcgt tttcggtcag agtggtgctg ggaacaactg ggccaagggg cactacacag
361 aaggcgcgga gctggtggac tcggtgctgg atgttgtgag aaaggaggct gagagctgtg
421 actgcctgca gggtttccag ctgacccact ccctgggtgg ggggactggg tctgggatgg
481 gtaccctcct catcagcaag atccgggagg agtacccaga caggatcatg aacacgttta
541 gtgtggtgcc ttcgcccaaa gtgtcagaca cagtggtgga gccctacaac gccaccctct
601 cagtccacca gctcgtagaa aacacagacg agacctactg cattgataac gaagctctct
661 acgacatttg cttcagaacc ctaaagctga ccacgcccac ctatggtgac ctgaaccacc
721 tggtgtctgc taccatgagt ggggtcacca cctgcctgcg cttcccaggc cagctcaatg
781 ctgacctgcg gaagctggct gtgaacatgg tcccgtttcc ccggctgcac ttcttcatgc
841 ccggctttgc cccactgacc agccggggca gccagcagta ccgggcgctg accgtgcccg
901 agctcaccca gcagatgttt gatgccaaga acatgatggc tgcctgcgac ccccgccatg
961 gccgctacct gacggttgcc gccgtgttca ggggccgcat gtccatgaag gaggtggatg
1021 agcaaatgct taatgtccaa aacaaaaaca gcagctattt tgttgagtgg atccccaaca
1081 atgtgaaaac ggctgtctgt gacatcccac ctcgggggct aaaaatgtcc gccaccttca
1141 ttggcaacag cacggccatc caggagctgt tcaagcgcat ctccgagcag ttcacggcca
1201 tgttccggcg caaggccttc ctgcactggt acacgggcga gggcatggac gagatggagt
1261 tcaccgaggc cgagagcaac atgaatgacc tggtgtccga gtaccagcac taccaggatg
1321 ccacagccga ggaggagggc gagttcgagg aggaggctga ggaggaggtg gcctagagcc
1381 ttcagtcact ggggaaagca gggaagcagt gtgaactctt tattcactcc cagcctgtcc
1441 tgtggcctgt cccactgtgt gcacttgctg ttttccctgt ccacatccat gctgtacaga
1501 caccaccatt aaagcatttt catagtgaaa aaaaaaaaaa aaaa
//