LOCUS BC024009 2394 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens leucine rich repeat containing 50, mRNA (cDNA clone MGC:26709 IMAGE:4822973), complete cds. ACCESSION BC024009 VERSION BC024009.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2394) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2394) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC024009.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: e Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40255219. FEATURES Location/Qualifiers source 1..2394 /db_xref="H-InvDB:HIT000050872" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26709 IMAGE:4822973" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2394 /gene="LRRC50" /gene_synonym="FLJ25330" /db_xref="GeneID:123872" /db_xref="HGNC:HGNC:30539" CDS 125..2302 /gene="LRRC50" /gene_synonym="FLJ25330" /codon_start=1 /product="leucine rich repeat containing 50" /protein_id="AAH24009.3" /db_xref="GeneID:123872" /db_xref="HGNC:HGNC:30539" /translation="MHPEPSEPATGGAAELDCAQEPGVEESAGDHGSAGRGGCKEEIN DPKEICVGSSDTSYHSQQKQSGDNGSGGHFAHPREDREDRGPRMTKSSLQKLCKQHKL YITPALNDTLYLHFKGFDRIENLEEYTGLRCLWLQSNGIQKIENLEAQTELRCLFLQM NLLRKIENLEPLQKLDALNLSNNYIKTIENLSCLPVLNTLQMAHNHLETVEDIQHLQE CLRLCVLDLSHNKLSDPEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVRLKHLT YLDDRPVFPKDRACAEAWARGGYAAEKEERQQWESRERKKITDSIEALAMIKQRAEER KRQRESQERGEMTSSDDGENVPASAEGKEEPPGDRETRQKMELFVKESFEAKDELCPE RPSGEEPPVEAKREDGGPEPEGTLPAETLLLSSPVEVKGEDGDGEPEGTLPAEAPPPP PPVEVKGEDGDQEPEGTLPAETLLLSPPVKVKGEDGDREPEGTLPAEAPPPLPLGAAR EEPTPQAVATEGVFVTELDGTRTEDLETIRLETKETCCIDDLPDLEDDDETGKSLEDQ NMCFPKIEVISSLSDDSDPELDYTSLPVLENLPTDTLSNIFAVSKDTSKAARVPFTDI FKKEAKRDSEIRKQDTKSPRPLIQELSDEDPSGQPLMPPTCQRDAAPLTSTGDRDSDF LAASSPVPTESAATPPETCVGVAQPSQALPTWDLTAFPAPKAS" BASE COUNT 680 a 602 c 680 g 432 t ORIGIN 1 agggggccag cggctggcga agaaggaaag agggtactct ctggctgggc tggggccgta 61 gcgacgtccg ccgcgaacct gggcccccca aagctgcggg gcgttcggtg tcgccgaagt 121 aaacatgcac cctgagccct cggagcctgc gacaggtggt gcagcagagc tggattgcgc 181 gcaggagccc ggcgtggagg agtctgcggg tgaccacggg agcgcaggcc gagggggctg 241 caaggaagaa attaatgatc ctaaggaaat atgtgtgggt tcttctgaca catcctacca 301 cagccagcag aaacagagtg gtgataatgg gtcaggtggt cacttcgcac acccaagaga 361 agacagggaa gatcggggcc ccagaatgac taaaagttcc ctgcaaaaac tctgcaagca 421 gcacaagctt tatattaccc cagcattgaa tgatacgctg tatttacact ttaaaggttt 481 tgatcgcatt gagaacctgg aagagtacac agggctgcgc tgtctctggc tgcagagcaa 541 tggaatacag aaaatcgaaa acctggaggc ccaaactgag ttgcgttgcc tcttcttgca 601 aatgaacttg ctccgtaaaa ttgagaacct ggaacctctg cagaaactgg atgctcttaa 661 cctcagcaac aattacatca agaccattga aaacctctcc tgcctcccag tcctgaacac 721 attgcagatg gcccacaatc acctggagac cgtggaggac attcagcatc tacaagagtg 781 tttgaggctt tgtgtccttg acctttcgca caacaagctg agtgacccgg agatcctgag 841 cattctggaa agcatgcccg atttgcgtgt actgaatttg atgggaaacc cggttatcag 901 acagattcct aattacagaa ggacagtcac tgtacgacta aagcacttaa catacctgga 961 tgatagacca gtgtttccaa aggacagagc ttgtgcggag gcctgggcta ggggagggta 1021 cgcagctgaa aaggaggaga gacagcagtg ggagagcagg gagcggaaga agatcacaga 1081 cagcattgaa gccttggcca tgatcaagca gcgggcagag gagaggaaaa gacagagaga 1141 gagtcaagag agaggggaga tgacatcttc agatgatggt gagaatgtgc ccgccagtgc 1201 ggaaggcaag gaggagcctc ccggggacag agaaacaagg cagaagatgg agctatttgt 1261 taaggaaagc tttgaggcca aggacgagct ctgcccggaa aggccaagtg gagaggagcc 1321 gcctgtggag gctaaaagag aggatggagg tccagagcca gaggggaccc tcccagctga 1381 gaccctgcta ctgtcgtcac ctgtggaggt taaaggagag gacggagatg gagagccaga 1441 ggggaccctc ccagctgagg ccccaccacc cccgccacct gtggaggtta aaggagagga 1501 tggagatcaa gagccagagg ggaccctccc agctgagacc ctgctactgt caccgcctgt 1561 gaaggttaaa ggagaggatg gagatcgaga gccagagggg accctcccag ctgaggcccc 1621 accaccactg cccctgggag ctgccaggga agaaccgact ccccaggctg tggccactga 1681 gggtgtattc gttacagaac ttgatggaac gagaacggaa gatttagaaa ccattagact 1741 ggagacaaag gagacatgct gcattgatga cctacctgac ttggaagatg atgatgaaac 1801 aggcaaatct ctggaagacc agaatatgtg ctttccgaag attgaggtca tctcgagctt 1861 gagtgatgac agtgaccctg aactggacta cacgtcactc cctgtgctgg aaaacctgcc 1921 cacagacact ctgtcaaata tatttgcagt ctctaaagac acctcaaagg cggctcgggt 1981 gcccttcaca gacatcttta aaaaagaagc taagagggac tcggaaatcc gaaaacaaga 2041 caccaagtcc ccaagacccc tgatccagga gctcagcgac gaggacccct ctggccagcc 2101 actgatgccc cccacctgcc aaagagatgc tgcaccactc acttccactg gagacaggga 2161 cagcgacttc cttgcagcct cttctccggt gccgactgag agcgccgcca cacccccaga 2221 gacgtgtgtc ggagttgccc agcccagcca agctctgccc acgtgggacc tcactgcatt 2281 cccagcaccg aaagcatcat agttttcccc agttatatgt agcataaatg gtttaattat 2341 aaatgtctcc cttaggcatg ataaacattt taacacccaa aaaaaaaaaa aaaa //