LOCUS BC023612 1113 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens DNA (cytosine-5-)-methyltransferase 3 alpha, mRNA (cDNA clone IMAGE:4647146), partial cds. ACCESSION BC023612 VERSION BC023612.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1113) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1113) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC023612.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 33 Row: f Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1113 /db_xref="H-InvDB:HIT000090813" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4647146" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1113 /gene="DNMT3A" /gene_synonym="DNMT3A2" /gene_synonym="M.HsaIIIA" /db_xref="GeneID:1788" /db_xref="HGNC:HGNC:2978" /db_xref="MIM:602769" CDS <1..1058 /gene="DNMT3A" /gene_synonym="DNMT3A2" /gene_synonym="M.HsaIIIA" /codon_start=3 /product="DNMT3A protein" /protein_id="AAH23612.1" /db_xref="GeneID:1788" /db_xref="HGNC:HGNC:2978" /db_xref="MIM:602769" /translation="CVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRL QMFFANNHDQEFDPPKVYPPVPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIAS EVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARK GLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVSDKRDISRFLESNPVM IDAKEVSAAHRARYFWGNLPGMNRPLASTVNDKLELQECLEHGRIAKFSKVRTITTRS NSIKQGKDQHFPVFMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSV PVIRHLFAPLKEYFACV" BASE COUNT 256 a 285 c 334 g 238 t ORIGIN 1 agtgtgtgga cctcttggtg gggccggggg ctgcccaggc agccattaag gaagacccct 61 ggaactgcta catgtgcggg cacaagggta cctacgggct gctgcggcgg cgagaggact 121 ggccctcccg gctccagatg ttcttcgcta ataaccacga ccaggaattt gaccctccaa 181 aggtttaccc acctgtccca gctgagaaga ggaagcccat ccgggtgctg tctctctttg 241 atggaatcgc tacagggctc ctggtgctga aggacttggg cattcaggtg gaccgctaca 301 ttgcctcgga ggtgtgtgag gactccatca cggtgggcat ggtgcggcac caggggaaga 361 tcatgtacgt cggggacgtc cgcagcgtca cacagaagca tatccaggag tggggcccat 421 tcgatctggt gattgggggc agtccctgca atgacctctc catcgtcaac cctgctcgca 481 agggcctcta cgagggcact ggccggctct tctttgagtt ctaccgcctc ctgcatgatg 541 cgcggcccaa ggagggagat gatcgcccct tcttctggct ctttgagaat gtggtggcca 601 tgggcgttag tgacaagagg gacatctcgc gatttctcga gtccaaccct gtgatgattg 661 atgccaaaga agtgtcagct gcacacaggg cccgctactt ctggggtaac cttcccggta 721 tgaacaggcc gttggcatcc actgtgaatg ataagctgga gctgcaggag tgtctggagc 781 atggcaggat agccaagttc agcaaagtga ggaccattac tacgaggtca aactccataa 841 agcagggcaa agaccagcat tttcctgtct tcatgaatga gaaagaggac atcttatggt 901 gcactgaaat ggaaagggta tttggtttcc cagtccacta tactgacgtc tccaacatga 961 gccgcttggc gaggcagaga ctgctgggcc ggtcatggag cgtgccagtc atccgccacc 1021 tcttcgctcc gctgaaggag tattttgcgt gtgtgtaagg gacatggggg caaactgagg 1081 tagcgacaca aagttaaaaa aaaaaaacaa aaa //