LOCUS BC023594 939 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens ribosomal protein L7a, mRNA (cDNA
clone MGC:23150 IMAGE:4841982), complete cds.
ACCESSION BC023594
VERSION BC023594.2
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 939)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 939)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023594.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..939
/db_xref="H-InvDB:HIT000050841"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Eye, normal, pigmented
retinal epithelium"
/db_xref="taxon:32630"
/clone="MGC:23150 IMAGE:4841982"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..939
/gene="RPL7A"
/gene_synonym="SURF3"
/gene_synonym="TRUP"
/db_xref="GeneID:6130"
/db_xref="HGNC:HGNC:10364"
/db_xref="MIM:185640"
CDS 62..862
/gene="RPL7A"
/gene_synonym="SURF3"
/gene_synonym="TRUP"
/codon_start=1
/transl_table=11
/product="ribosomal protein L7a"
/protein_id="AAH23594.1"
/db_xref="GeneID:6130"
/db_xref="HGNC:HGNC:10364"
/db_xref="MIM:185640"
/translation="MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQD
IQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKY
RPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHD
VDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKL
VEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG"
BASE COUNT 276 a 227 c 242 g 194 t
ORIGIN
1 agagagagaa ctagtctcga gttttttttt tttttttttc tctctcctcc cgccgcccaa
61 gatgccgaaa ggaaagaagg ccaagggaaa gaaggtggct ccggccccag ctgtcgtgaa
121 gaagcaggag gctaagaaag tggtgaatcc cctgtttgag aaaaggccta agaattttgg
181 cattggacag gacatccagc ccaaaagaga cctcacccgc tttgtgaaat ggccccgcta
241 tatcaggttg cagcggcaga gagccatcct ctataagcgg ctgaaagtgc ctcctgcgat
301 taaccagttc acccaggccc tggaccgcca aacagctact cagctgctta agctggccca
361 caagtacaga ccagagacaa agcaagagaa gaagcagaga ctgttggccc gggccgagaa
421 gaaggctgct ggcaaagggg acgtcccaac gaagagacca cctgtccttc gagcaggagt
481 taacaccgtc accaccttgg tggagaacaa gaaagctcag ctggtggtga ttgcacacga
541 cgtggatccc atcgagctgg ttgtcttctt gcctgccctg tgtcgtaaaa tgggggtccc
601 ttactgcatt atcaagggaa aggcaagact gggacgtcta gtccacagga agacctgcac
661 cactgtcgcc ttcacacagg tgaactcgga agacaaaggc gctttggcta agctggtgga
721 agctatcagg accaattaca atgacagata cgatgagatc cgccgtcact ggggtggcaa
781 tgtcctgggt cctaagtctg tggctcgtat cgccaagctc gaaaaggcaa aggctaaaga
841 acttgccact aaactgggtt aaatgtacac tgttgagttt tctgtacata aaaataattg
901 aaataataca aattttcctt caaaaaaaaa aaaaaaaaa
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