LOCUS BC023589 4132 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens drebrin-like, mRNA (cDNA clone IMAGE:4843899), with
apparent retained intron.
ACCESSION BC023589
VERSION BC023589.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4132)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4132)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023589.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4132
/db_xref="H-InvDB:HIT000090800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4843899"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 916 a 1094 c 1210 g 912 t
ORIGIN
1 atttgacaca tgaatgtata gcagtcattg ggaaactcca cagctcatgt tttcctcata
61 gtagatgtgt gctcccatct ccatggcttt gtccctcaca acccccaccc catggtaagt
121 caggccagtg tcctcccagc tgcagagctg agaaggctgc acagttgcct actgagaacc
181 tgcctagtgg gtcagagcaa agtgagaacg ggcctgtgcc cacccacagt gttactgtca
241 gcccaagctc tttgggatgt agtggaaagt catggtggat acggtgagga gagatggaac
301 ccaaggtgct ggctacagag ctcacttgtg tttcgtttca gggctctctt tacctatgaa
361 ggcaacagca atgacatccg cgtggctggc acagggggtg agtatgactc caaatggact
421 cagggacacc aggaggtagg agggtgacga cgaggggtca gcgcactcag ctgtcttggt
481 ccactgagcc acatggggct tccagtgctc actggccact tctggcaggc cttaggtttc
541 agatatgtgt aagtgaaaac attcctcctt ggttctcctt ccctctgggt gcaggggagt
601 gctttctctt tgtctacttg gggagagctg agagggaaac aggcctctcc agcttgtggg
661 cagcctgcgt tgggagctgc ggtgggaagc tcaccagtcc cagaactggt gctggtggaa
721 agaaagtcca cagacatatc ttcttctccc tttgtcctgc cctggtcttg tgccgagtgc
781 ttgcaggggc cccatcctca ctgggagagg cagtatcact gcagatagtc acgggggagg
841 ctctggaggt ctctacagga aggacaggct cttggccagc acagagcaga ggttgtcagg
901 gtaggcttcg tcagagtgtg acctgtgggc ccctcagctg acacccgtga ctgctcctcc
961 tccagaagtt gcctgacccc tccctctgtc ctgagctgga catggcttca ttgttcaatg
1021 aacactcgga gtggttctcc acggtttgat gtctgttgtt ggtagaaagc cccttccttt
1081 cacaatcttt ctgggaggtg tcccctttct agaaggattg ccattgaaca gtagacatgt
1141 ggtgtggcag gtgactggga gttgcagaga tcaacaactt gagagtttcc tgtcatcccc
1201 agtggcacag gacagggctc tgccacaaat gcaacaattt gctgtcccca gagtggggct
1261 catgactgcc tccactcata cggagccctg tagatgaaat acctgatcag ctcttcctcc
1321 ttataacctg gaaaagtttg tgagggctaa gcctcagtgt cagggagaat tgtttagagc
1381 tgcccactcc tgtgctcccc ctgtccccat caccctctct tctggagtct gaggactgag
1441 ccagttacgc cactgcagga tgttcaatct ggtctggccg tctgggtggc cctggaactt
1501 gagcagacac aggtgcaggc agtggtgact ctacaggccc tgctattccg ggcccttttg
1561 caacgttgtg gcaacaataa aattttgacg tagccatcct ccatttggaa gtctggtggc
1621 tggtttgccg tggaaatgac cctgttttta tttccagaat tacctctggg tttagagaag
1681 tggtttttaa acgagtgtgg gtaaaaaaat tacctgaggt acttgtcaga atcgcagact
1741 tctaggtccc acccagctct catcaatcag tttagtgagg gtggtgccca ggactctgat
1801 tttaaacata cccctagaaa gattctgata caggtagagg tgagaagccc tggtttagaa
1861 gcagctcggc ctcccttcat ggtgggacca gggccagcag ggaatgtcag ggccacccct
1921 gaccttcact gtgactctgc tgcagagggt ggcctggagg agatggtgga ggagctcaac
1981 agcgggaagg tgatgtacgc cttctgcaga gtgaaggacc ccaactctgg actgcccaaa
2041 tttgtcctca tcaactggac aggcgagggc gtgaacgatg tgcggaaggg agcctgtgcc
2101 agccacgtca gcaccatggc cagcttcctg aagggggccc atgtgaccat caacgcacgg
2161 gccgaggagg atgtggagcc tgagtgcatc atggagaagg tggccaaggc ttcaggtgcc
2221 aactacagct ttcacaagga gagtggccgc ttccaggacg tgggacccca ggccccagtg
2281 ggctctgtgt accagaagac caatgccgtg tctgagatta aaagggttgg taaagacagc
2341 ttctgggcca aagcagaggt gagtgctgcc ccggggcatg ctgggcacgt gggagtgttc
2401 tgcttgctgt ggctcatctt tcctcacaag tgagctcatg cagcatccac tctccttggt
2461 gcccattaca gatggtcaca ctgaggctcg ggtaagttaa gccacaaggc taatgatcga
2521 ctggctctgg tgcccgtctt tggccatgtg cctaaaactc agtcctgggc aggggattag
2581 gctgaagtgg cagcataggg ctgagcgggc agtggctctc cctgcagaag gaggaggaga
2641 accgtcggct ggaggaaaag cggcgggccg aggaggcaca gcggcagctg gagcaggagc
2701 gccgggagcg tgagctgcgt gaggctgcac gccgggagca gcgctatcag gagcagggtg
2761 gcgaggccag cccccagagg acgtgggagc agcagcaaga agtggtttca aggaaccgaa
2821 atgagcagga gtctgccgtg cacccgaggg agattttcaa gcagaaggag agggccatgt
2881 ccaccacctc catctccagt cctcagcctg gcaagctgag gagccccttc ctgcagaagc
2941 agctcaccca accagagacc cactttggca gagagccagc tgctgccatc tcaaggccca
3001 gggcagatct ccctgctgag gagccggcgc ccagcactcc tccatgtctg gtgcaggcag
3061 aagaggaggc tgtgtatgag gaacctccag agcaggagac cttctacgag cagcccccac
3121 tggtgcagca gcaaggtgct ggctctgagc acattgacca ccacattcag ggccaggggc
3181 tcagtgggca agggctctgt gcccgtgccc tgtacgacta ccaggcagcc gacgacacag
3241 agatctcctt tgaccccgag aacctcatca cgggcatcga ggtgatcgac gaaggctggt
3301 ggcgtggcta tgggccggat ggccattttg gcatgttccc tgccaactac gtggagctca
3361 ttgagtgagg ctgagggcac atcttgccct tcccctctca gacatggctt ccttattgct
3421 ggaagaggag gcctgggagt tgacattcag cactcttcca ggaataggac ccccagtgag
3481 gatgaggcct cagggctccc tccggcttgg cagactcagc ctgtcacccc aaatgcagca
3541 atggcctggt gattcccaca catccttcct gcatcccccg accctcccag acagcttggc
3601 tcttgcccct gacaggatac tgagccaagc cctgcctgtg gccaagccct gagtggccac
3661 tgccaagctg cggggaaggg tcctgagcag gggcatctgg gaggctctgg ctgccttctg
3721 catttatttg ccttttttct ttttctcttg cttctaaggg gtggtggcca ccactgttta
3781 gaatgaccct tgggaacagt gaacgtagag aattgttttt agcagagttt gtgaccaaag
3841 tcagagtgga tcatggtggt ttggcagcag ggaatttgtc ttgttggagc ctgctctgtg
3901 ctccccactc catttctctg tccctctgcc tgggctatgg gaagtgggga tgcagatggc
3961 caagctccca ccctgggtat tcaaaaacgg cagacacaac atgttcctcc acgcggctca
4021 ctcgatgcct gcaggcccca gtgtgtgcct caactgattc tgacttcagg aaaagtaaca
4081 cagagtggca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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