LOCUS BC023552 1417 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stratifin, mRNA (cDNA clone MGC:19713 IMAGE:3534328),
complete cds.
ACCESSION BC023552
VERSION BC023552.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1417)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1417)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023552.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: d Column: 3.
FEATURES Location/Qualifiers
source 1..1417
/db_xref="H-InvDB:HIT000050823"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19713 IMAGE:3534328"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1417
/gene="SFN"
/db_xref="GeneID:2810"
/db_xref="HGNC:HGNC:10773"
/db_xref="MIM:601290"
CDS 76..822
/gene="SFN"
/codon_start=1
/product="stratifin"
/protein_id="AAH23552.1"
/db_xref="GeneID:2810"
/db_xref="HGNC:HGNC:10773"
/db_xref="MIM:601290"
/translation="MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLL
SVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGL
LDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKK
EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTL
IMQLLRDNLTLWTADNAGEEGGEAPQEPQS"
BASE COUNT 363 a 414 c 414 g 226 t
ORIGIN
1 gcaggagaga cacagagtcc ggcattggtc ccaggcagca gttagcccgc cgcccgcctg
61 tgtgtcccca gagccatgga gagagccagt ctgatccaga aggccaagct ggcagagcag
121 gccgaacgct atgaggacat ggcagccttc atgaaaggcg ccgtggagaa gggcgaggag
181 ctctcctgcg aagagcgaaa cctgctctca gtagcctata agaacgtggt gggcggccag
241 agggctgcct ggagggtgct gtccagtatt gagcagaaaa gcaacgagga gggctcggag
301 gagaaggggc ccgaggtgcg tgagtaccgg gagaaggtgg agactgagct ccagggcgtg
361 tgcgacaccg tgctgggcct gctggacagc cacctcatca aggaggccgg ggacgccgag
421 agccgggtct tctacctgaa gatgaagggt gactactacc gctacctggc cgaggtggcc
481 accggtgacg acaagaagcg catcattgac tcagcccggt cagcctacca ggaggccatg
541 gacatcagca agaaggagat gccgcccacc aaccccatcc gcctgggcct ggccctgaac
601 ttttccgtct tccactacga gatcgccaac agccccgagg aggccatctc tctggccaag
661 accactttcg acgaggccat ggctgatctg cacaccctca gcgaggactc ctacaaagac
721 agcaccctca tcatgcagct gctgcgagac aacctgacac tgtggacggc cgacaacgcc
781 ggggaagagg ggggcgaggc tccccaggag ccccagagct gagtgttgcc cgccaccgcc
841 ccgccctgcc ccctccagtc ccccaccctg ccgagaggac tagtatgggg tgggaggccc
901 cacccttctc ccctaggcgc tgttcttgct ccaaagggct ccgtggagag ggactggcag
961 agctgaggcc acctggggct ggggatccca ctcttcttgc agctgttgag cgcacctaac
1021 cactggtcat gcccccaccc ctgctctccg cacccgcttc ctcccgaccc caggaccagg
1081 ctacttctcc cctcctcttg cctccctcct gcccctgctg cctctgatcg taggaattga
1141 ggagtgtccc gccttgtggc tgagaactgg acagtggcag gggctggaga tgggtgtgtg
1201 tgtgtgtgtg tgtgtgtgtg tgtgcgcgcg cgccagtgca agaccgagat tgagggaaag
1261 catgtctgct gggtgtgacc atgtttcctc tcaataaagt tcccctgtga cactccaaaa
1321 aaaaaaacaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//