LOCUS BC023549 2972 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens Fas (TNFRSF6) binding factor 1, mRNA (cDNA clone
MGC:16590 IMAGE:4109753), complete cds.
ACCESSION BC023549
VERSION BC023549.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2972)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2972)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023549.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: b Column: 24.
FEATURES Location/Qualifiers
source 1..2972
/db_xref="H-InvDB:HIT000050820"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16590 IMAGE:4109753"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2972
/gene="FBF1"
/gene_synonym="FBF-1"
/gene_synonym="FLJ00103"
/db_xref="GeneID:85302"
/db_xref="HGNC:HGNC:24674"
CDS 262..2754
/gene="FBF1"
/gene_synonym="FBF-1"
/gene_synonym="FLJ00103"
/codon_start=1
/product="Fas (TNFRSF6) binding factor 1"
/protein_id="AAH23549.1"
/db_xref="GeneID:85302"
/db_xref="HGNC:HGNC:24674"
/translation="MAPKTKKGCKVTLPEKPVKLASHTRDTTGVSQMFPSSKARTKSL
LGDDVFSTMAGLEEADAEVSVISEADPQALLQAMKDLDGMDADILGLKKSNSAPSKKA
AKDPGKGELPNHPKPAGGAIPTKKSLPSPSSSGHQNRRFSSEDLEDPLGGLLSYDEGG
ITKQPPVTQSKTASDKSPSTVRDQGPSIPLTPGDTPIRKKEELLFDDGDDIMATLGFG
DSPKAEKRQIGDQEGPRPARSTLDELLGRGMATKLLARPGTGEHREFKLDKKYQRPQD
SEDMWGDEDFTFGAYQPTVVSSEGRQSRRQSVSRFFADSGADPKGEPGSKQSPPMASS
PIQPRKGGADWLGLKDEDLDLFPASPTREAHRESSVPVTPSVPPPASQHSTPAGLPPS
RAKPPTEGAGSPAKASQASKLRASKEEKEDWLSHALSRKKSQGLAREQHAGTSEGLHL
AGTAGHPPSGSQPLTSTQGLEHAAAGGSSGTTARERPCVRPGVSGSPVTQNHAASALP
TGSPKRGTAPGDLSATEPATCFPSTQKPTEPSVPVQPLLPESLARSLLPSTEYQKQLL
AAQVQLQCSPAELQAELLHSQARLAELEAQVRKLELERAQHELLLGSLQQQHQADLEL
IESAHRSRIKVLETSYQQREERLRRENEELSARYLSQCQEAEQARAELTAQHQRRLAA
IAQEKDQEMERLRELQRASILDMRRDHEEQLQRLKLLKDREVDAATSATSHTRSLNSI
IHQMEKFSSSLHELSSRVEASHLTTSQERELGIRQRDEQLRALQERLGQQQRDMRRDE
EGSLCAAHLPKAQLSGYAVEATRNQSQLQRFL"
BASE COUNT 819 a 853 c 861 g 439 t
ORIGIN
1 ggcagcggct ggaagcggga ggccagtcct ggccgggctg ggcgacccga atggagccag
61 ggccggcgct ggtcccagcg gccgcacctc cgggggcacg gcgcgtaaca ggaggcttcc
121 ggggctgaga gcgttacagg ctgcgctccg gggccagata ggccgggcgc tcagaagggg
181 agtatgagcc tgatgtgggc agaatccaga tgagctggcc agtgctgtga aggagctgag
241 agcacccccg agagccgtga gatggcacca aaaaccaaga aaggatgtaa agtgacacta
301 cctgagaagc ctgttaaact agcttcacat accagagaca ccacaggtgt atctcagatg
361 ttcccttctt caaaggcgag aacaaagtcc ctcctgggtg atgatgtctt cagcaccatg
421 gcaggcctgg aagaagctga tgctgaggtt tcagttatct cagaggcaga cccacaggct
481 ctgctccagg ccatgaagga cctggacggc atggatgctg atatcttagg tctgaagaaa
541 tctaattcag cccctagcaa aaaagctgca aaggaccctg ggaaaggaga gctgcccaac
601 caccccaagc ctgcaggggg tgccattccc accaagaagt cacttccgtc tcccagcagc
661 tctgggcatc agaacaggag gttttcctct gaagacttgg aagacccatt gggaggactt
721 ctctcctatg atgaaggagg aatcaccaag cagccgcctg tgacacagag taaaacagct
781 tctgacaaga gccccagcac agtgagagat caaggtccct ctattcctct aactcctggg
841 gacaccccca tccgaaaaaa agaagaattg ttgtttgatg atggggatga catcatggcc
901 accttggggt ttggagacag ccccaaagca gagaagaggc agataggaga ccaggaaggg
961 cctcgccctg ctcgctccac gctggatgag ctgctgggtc gaggcatggc caccaaactc
1021 ctggcccgcc cgggcaccgg ggagcacagg gagttcaagc tagacaagaa gtaccagagg
1081 ccacaggaca gtgaagatat gtggggtgac gaggacttca cctttggagc ctatcagccc
1141 actgtggtct cctctgaggg ccggcagtcc cgccggcagt ctgtcagtag gttcttcgca
1201 gacagtggcg cagaccccaa gggagaacca ggctccaaac agagccctcc aatggcttcc
1261 agccccatcc agcccaggaa gggaggagct gactggttgg gcctcaagga cgaggacttg
1321 gacctgttcc ctgcctcacc caccagagag gcccatcggg aaagttcagt gcctgtcacg
1381 ccctcagtgc ctcctcctgc gagccagcac tccacgccag ctgggctgcc cccctccagg
1441 gcaaagccac caactgaagg tgcagggtcc cctgccaaag ccagccaggc ttccaagctg
1501 cgagcctcca aggaggagaa agaggactgg ctgagccatg ccctgtctcg gaagaagtcc
1561 caaggcctgg ccagagagca gcatgctggg acctctgagg gcctgcattt ggcggggaca
1621 gcgggccatc ccccttctgg cagccaacct ctcaccagca cacaagggct tgagcacgca
1681 gctgctggag ggagttctgg aacaactgca cgagaaagac cgtgtgtcag gcctggtgtc
1741 tcggggtccc ctgtgactca gaaccatgcc gcctcagcac tccctacagg ttccccaaag
1801 aggggaacag cccctggaga cctctcagcc actgagcctg ccacgtgttt cccgagcacc
1861 cagaaaccca cagagccttc cgtgcccgtc cagcccctgc tcccagagtc cctggcccgg
1921 agcctgctgc cgagcacaga ataccagaag cagctcctgg cagcacaggt gcaacttcag
1981 tgcagccccg ctgagctcca ggccgagctg ctgcatagcc aggcccggct ggcagagctg
2041 gaggcccagg tgcggaagct ggagctagaa cgggcccagc atgagctgct gctggggagt
2101 ctgcagcagc agcaccaggc agacctggag ctcatcgaga gtgcacacag aagccgcatc
2161 aaggtgctag aaacatcgta ccagcaacgg gaggagcggc tccggagaga gaacgaagag
2221 ctgtcagctc ggtatctgtc gcagtgccag gaggctgaac aggcccgtgc tgagcttacg
2281 gcccagcacc agcggcgctt ggcggccata gcgcaggaga aggaccagga aatggagcgg
2341 ctccgggagc tgcagcgggc gtccatccta gacatgcgca gagaccacga ggagcagctg
2401 cagcggctaa agctgctgaa ggaccgagag gtcgatgcgg ccaccagtgc cacctcccac
2461 acgcggtccc tgaatagcat catccaccag atggagaagt tctccagcag cctgcacgag
2521 ttgtcctccc gcgtggaggc ctcgcacctc accacctccc aggagcggga gctggggatc
2581 cggcagcgtg acgagcagct gcgggcactg caggagcggc tgggccagca gcagcgggac
2641 atgaggaggg acgaggaggg aagcctctgt gctgctcacc tgcccaaagc ccagctcagc
2701 gggtacgcag tggaggcgac aaggaaccaa tcacaactac agaggtttct ctgatcctcc
2761 tccactcccg ctgcttcaac ttgactaagc ttaaaaaaac tgcttttgcc atggctaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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