LOCUS BC023548 1525 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens actin, gamma 1, mRNA (cDNA clone IMAGE:4109821),
partial cds.
ACCESSION BC023548
VERSION BC023548.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1525)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1525)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023548.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: b Column: 22.
FEATURES Location/Qualifiers
source 1..1525
/db_xref="H-InvDB:HIT000090782"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4109821"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1525
/gene="ACTG1"
/gene_synonym="ACTG"
/gene_synonym="DFNA20"
/gene_synonym="DFNA26"
/db_xref="GeneID:71"
/db_xref="MIM:102560"
CDS <1..794
/gene="ACTG1"
/gene_synonym="ACTG"
/gene_synonym="DFNA20"
/gene_synonym="DFNA26"
/codon_start=3
/product="ACTG1 protein"
/protein_id="AAH23548.1"
/db_xref="GeneID:71"
/db_xref="MIM:102560"
/translation="KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSG
DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC
GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
misc_feature 3..791
/gene="ACTG1"
/gene_synonym="ACTG"
/gene_synonym="DFNA20"
/gene_synonym="DFNA26"
/note="actin; Region: Actin"
/db_xref="CDD:pfam00022"
BASE COUNT 356 a 396 c 392 g 381 t
ORIGIN
1 ccaaggccaa cagagagaag atgactcaga ttatgtttga gaccttcaac accccggcca
61 tgtacgtggc catccaggcc gtgctgtccc tctacgcctc tgggcgcacc actggcattg
121 tcatggactc tggagacggg gtcacccaca cggtgcccat ctacgagggc tacgccctcc
181 cccacgccat cctgcgtctg gacctggctg gccgggacct gaccgactac ctcatgaaga
241 tcctcactga gcgaggctac agcttcacca ccacggccga gcgggaaatc gtgcgcgaca
301 tcaaggagaa gctgtgctac gtcgccctgg acttcgagca ggagatggcc accgccgcat
361 cctcctcttc tctggagaag agctacgagc tgcccgatgg ccaggtcatc accattggca
421 atgagcggtt ccggtgtccg gaggcgctgt tccagccttc cttcctgggt atggaatctt
481 gcggcatcca cgagaccacc ttcaactcca tcatgaagtg tgacgtggac atccgcaaag
541 acctgtacgc caacacggtg ctgtcgggcg gcaccaccat gtatccgggc attgccgaca
601 ggatgcagaa ggagatcacc gccctggcgc ccagcaccat gaagatcaag atcatcgcac
661 ccccagagcg caagtactcg gtgtggatcg gtggctccat cctggcctca ctgtccacct
721 tccagcagat gtggattagc aagcaggagt acgacgagtc gggcccctcc atcgtccacc
781 gcaaatgctt ctaaacggac tcagcagatg cgtagcattt gctgcatggg ttaattgaga
841 atagaaattt gcccctggca aatgcacaca cctcatgcta gcctcacgaa actggaataa
901 gccttcgaaa agaaattgtc cttgaagctt gtatctgata tcagcactgg attgtagaac
961 ttgttgctga ttttgacctt gtattgaagt taactgttcc ccttggtatt tgtttaatac
1021 cctgtacata tctttgagtt caacctttag tacgtgtggc ttggtcactt cgtggctaag
1081 gtaagaacgt gcttgtggaa gacaagtctg tggcttggtg agtctgtgtg gccagcagcc
1141 tctgatctgt gcagggtatt aacgtgtcag ggctgagtgt tctgggattt ctctagaggc
1201 tggcaagaac cagttgtttt gtcttgcggg tctgtcaggg ttggaaagtc caagccgtag
1261 gacccagttt cctttcttag ctgatgtctt tggccagaac accgtgggct gttacttgct
1321 ttgagttgga agcggtttgc atttacgcct gtaaatgtat tcattcttaa tttatgtaag
1381 gttttttttg tacgcaattc tcgattcttt gaagagatga caacaaattt tggttttcta
1441 ctgttatgtg agaacattag gccccagcaa cacgtcattg tgtaaggaaa aataaaagtg
1501 ctgccgtaaa aaaaaaaaaa aaaaa
//