LOCUS BC023525 4104 bp mRNA linear HUM 30-JUN-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing
20, mRNA (cDNA clone MGC:14254 IMAGE:4128926), complete cds.
ACCESSION BC023525
VERSION BC023525.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4104)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023525.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: g Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255181.
FEATURES Location/Qualifiers
source 1..4104
/db_xref="H-InvDB:HIT000050810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14254 IMAGE:4128926"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4104
/gene="KCTD20"
/gene_synonym="dJ108K11.3"
/gene_synonym="MGC14254"
/db_xref="GeneID:222658"
/db_xref="HGNC:HGNC:21052"
CDS 130..891
/gene="KCTD20"
/gene_synonym="dJ108K11.3"
/gene_synonym="MGC14254"
/codon_start=1
/product="KCTD20 protein"
/protein_id="AAH23525.1"
/db_xref="GeneID:222658"
/db_xref="HGNC:HGNC:21052"
/translation="MNVHRGSDSDRLLRQEASCLVDDTLAVAQEKEANSLASSGPHNL
TYPLGPRNEGALLHELSNDGAHKQFDHYLEELILPIMVGCAKKGERECHIVVLTDEDS
VDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGYPT
CKEKIKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVAAGDD
VLEDQEILMHHPPQVDELDRLNAPLSQMASNDFQD"
BASE COUNT 1157 a 852 c 950 g 1145 t
ORIGIN
1 ctgcggcttc tggctgcgcg gcctgcgcgc gcctcccggg cggattccag ccccgagcgg
61 gacagcgcgg cggggagcga cgagatttct ctctgatcaa acggacagtt caggactcag
121 aatctaagga tgaatgttca ccgtggcagt gacagtgaca ggttattgcg gcaggaggcc
181 agctgcttag tggatgatac tttagctgta gcccaagaaa aagaagcaaa cagcctggct
241 tcatctggtc ctcataatct tacttatcct ctaggtccca ggaatgaagg tgctttactc
301 catgaactgt ctaatgacgg tgctcataag cagtttgatc actacctcga agagctcatc
361 ttgcccatca tggtgggctg tgccaagaaa ggagaacgag agtgccacat tgttgtgctg
421 acggatgagg attctgtgga ctgggatgaa gaccaccctc caccaatggg ggaggaatat
481 tcccaaattc tttatagctc caagctctac agattcttca aatatattga gaatagggat
541 gttgcaaaaa cagtgttaaa ggaacggggc ctaaaaaaca ttcgcattgg aattgaaggt
601 taccctacct gtaaagaaaa aattaagaga aggcctggcg gccggtctga agtcatctat
661 aattatgtac aacgcccctt catccagatg tcatgggaaa aggaagaagg gaagagtcgc
721 catgtggatt tccagtgtgt tcgaagcaaa tccctcacga atctggtagc tgctggagat
781 gatgtcttgg aggaccagga gatattaatg catcacccac cccaagtgga tgaacttgac
841 cggctaaatg ccccactttc tcagatggct tctaacgact ttcaggatta gggccagctg
901 tgggtctact ccttgttgga gcccatctca cctgggatgc ctgcagccag ccctccctcg
961 tgatttgtct caccttgagt aggagacatg cttctcccct aaccttttcc tttctgccat
1021 aattaacata tgtccttttc agtaagtcca tgcctctggc aggggatgaa gaagtactca
1081 ctggtaatta gctaccatct ttgcagcagc cctggtaact tgaaaaattt gggtctggtg
1141 ctgttcattg agtctttgtg taactgcaaa agcaggaaag gaagtcaaga ctcctgttgc
1201 ctcgtgctta gcaaagcagt ccttatcctt tatactctgt tcttgggttt tgtttttgtc
1261 ttgttttata ccaggcaaat tgcttagtag caaagggacc aaactgaaaa ggtgacaatc
1321 tctaacttct aaaagcagac accaatcgga tgctcattag aggttaatga agatgccatt
1381 cttggtggcc tctgcaccca aattgcatct ggaaagaact agggtctcat tcagaatgtc
1441 caaaaggaaa ttcttaagag cttaaattca gatttgtgtc tcattaatgc agtgaacaat
1501 tcaaaaccac acagattcct tggcaggaag gataatggaa taacagtgtt gatgagacct
1561 ttttagcttc aaggtttcgg agtctaaaca aatggatgat tcatttggaa tgaaactcac
1621 aatgcaagta gaaggacctc tccaaatcag gccagttggg ttatcctggc ttggaatctg
1681 gtgtgaaacc ataggtctta acactctgga gcagcacatt gctgtggata tgtccaggag
1741 accttagata tggcttaaag gctttcaaga tgaggacaga aattgcttac aattgctcag
1801 tttctcaaca gaaagactca taagagtgcc agcatggggt acatggagtg aagctgggtg
1861 ggaagcatca tctgcacagt ccctgtccta gtgcaggact tttctctgta tgttttcata
1921 ccatgggatt tttggatatc agtgtatttt ggttcttgaa atagcctaat agctgctcac
1981 acattgggta ggaatattat accaatgtca tccccaaagg aagggtgagc tgaatggaaa
2041 ttaagcccag tcattttatt tgatctatta gctctgttat cagtgcatga tcacccagat
2101 caccctcctc agcccacaca gtgctgaacc atcttccctc ctgttctcca tggctattaa
2161 tagtatagct aaatttagag tgcagagcca gatataagta ttttggaatt atctcccagt
2221 ttgtggtaga agctgactgg aatacaggtt gagtatctct tatccaaaat gctagggacc
2281 agaaaggttt cagatttttt cagattttgg aatacttaac agttgagcac cccaaatctg
2341 aaaggcttct gaacgtcatg tcagcactca aaaaagtgga ttttggagca cttcaaattt
2401 cggatttttg gatttgggat gctcatcctg tgtaggagag gctactcgat tccatttaat
2461 gactgtccta gtcataatca tccaaagata aaagccaggt agatgttgaa agctctttcc
2521 agggctgaaa aagtgttctt acgttctctg catgtgacta gcatcactgt ggaaattaat
2581 gctctgttct tcactagaat gtagtaagtg gttaaactga gctatccccc acctgatgac
2641 tattggcatc catttgcaag gccaatggcc tggattaagg gttaggatta tttgtagcta
2701 gaaggtaatt ttatttctgt gaaactaatt ggctcatatt tgaggttagg tgtggccttg
2761 accttaccag tacatttata cccactacca gttgactagc ccagataatt gttaaatggt
2821 gcttcttttc tgcttctcag tagacttcca tgccattaca aaggaaattt gaattaccta
2881 gtgtttgtat attccatgat aactatgtat aacttctgtt acacagctta tgtattgtta
2941 acatttaagt gtaaaccatg ccacagctaa cacttaaaaa tgaaaactaa ttagttcttg
3001 cttagggaaa atgccaggta tgaagtatgg catatacttg acactgtcct gtgtaaccct
3061 ttactttgct caggctttca agattgagtc ttttttcccc caaattaggt taacatgcat
3121 ttgaccccaa cctgtggggt ttgagtaagc tggaaatctg tgacggtagg ctttctagtg
3181 tcacgaggtg gtggtgactg aaggaaaagc tgggatcaca ggttccttct gatggagagg
3241 aaggtttatt tctatgcccc tcccaccacc ctccacctag agctcaccca agcctgctcc
3301 agtcccaggg gcaggccatt ctgcaaaagc aggacctcac agaaacaagg gctgggttga
3361 ggtcaccccc ttcagagttg gttcctggcc agatgggtaa gaggcatttg taattttaaa
3421 aatgtgaaac ttgggtttgg tgttttcttc taagtgccta aataagcaag ccaggctgtt
3481 gatattttag ccagagaaat cggcaagcca agattaaccc gaatctgaag tttagaatct
3541 tgagtttgca tctgcatcat atcatgctgt tttgatgagg aaacatttgc cactgaggag
3601 ttggagggag ggcaagacga cagtgttaag tcagatcatt taatggtttc ccctaagccc
3661 tggaaaaata tttgaaagaa tggcagcaaa aaggttaaga aagcaagcca gatttactgc
3721 acaatatgca gtacccagta ctactttaaa tcccaagaga acagtgtgat gtctaatata
3781 tacaggtcta tgaaaatact gtggaataag cccaggaagg ttagatgtgt ttgcaaataa
3841 gttgcccaaa gggtccccct ctaagtaaaa caaatattca gaccacaggc tttaatgtaa
3901 actgtcaaaa agtgggatgt ggaggatttt tgttaagtgt caatcgaagt taaaaagcaa
3961 gggtttttgg ccaggcgtgg tggctcacgc ctgtaatccc agcactttgg gaggccgagg
4021 ccggcaaatc acctaaggtc aggagttcga gaccagcctg gccaacatgg tgaaaccccg
4081 tctctactaa aaaaaaaaaa aaaa
//