LOCUS BC023142 1748 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens SECIS binding protein 2, mRNA (cDNA clone
IMAGE:3917564), partial cds.
ACCESSION BC023142
VERSION BC023142.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1748)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: a Column: 8.
FEATURES Location/Qualifiers
source 1..1748
/db_xref="H-InvDB:HIT000039698"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3917564"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1748
/gene="SBP2"
/gene_synonym="DKFZp434B216"
/gene_synonym="MGC3156"
/db_xref="GeneID:79048"
/db_xref="MIM:607693"
CDS <1..1516
/gene="SBP2"
/gene_synonym="DKFZp434B216"
/gene_synonym="MGC3156"
/codon_start=2
/product="SBP2 protein"
/protein_id="AAH23142.2"
/db_xref="GeneID:79048"
/db_xref="MIM:607693"
/translation="YNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEV
LTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDL
GGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDS
SAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENAVSPAFTSDDTQDGESGG
DDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHS
RRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHL
KLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAV
PVSVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQG
PSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEESLEASTSQMMNLNL"
misc_feature 920..1222
/gene="SBP2"
/gene_synonym="DKFZp434B216"
/gene_synonym="MGC3156"
/note="Ribosomal_L7Ae; Region: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 family. This family includes:
Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from
fungi, 30S ribosomal protein HS6 from archaebacteria, 40S
ribosomal protein S12 from eukaryotes, Ribosomal protein
L30 from eukaryotes and archaebacteria. Gadd45 and MyD118"
/db_xref="CDD:pfam01248"
BASE COUNT 567 a 388 c 436 g 357 t
ORIGIN
1 ctacaacaaa gaaaaacaca ttattcatcc tacccaaaag tctaaagcat cacaaggtag
61 tgaccttgaa caaaatgaag cctcaagaaa gaataagaaa aagaaagaaa aatctacatc
121 aaaatatgaa gtcctgacag ttcaagagcc tccaaggatt gaagatgccg aggaatttcc
181 caacctggca gttgcatctg aaagaagaga cagaatagag acaccgaaat ttcaatctaa
241 gcagcagcca caggataatt ttaaaaataa tgtaaagaag agccagcttc cagtgcagtt
301 ggacttgggg ggcatgctga cagccctgga gaagaagcag cactctcagc atgcaaagca
361 gtcctccaaa ccagtggtag tctcagttgg agcagtgcca gtcctttcca aagaatgtgc
421 atcaggggag agaggccgcc gcatgagtca aatgaagacc ccgcacaatc ccttggactc
481 cagcgcccca ctgatgaaga aagggaagca gagggagatc cccaaggcca agaagccaac
541 ctcactgaag aagattattt tgaaagaacg gcaagagaga aagcagcgtc tccaagaaaa
601 tgctgtgagt ccagctttta ccagtgatga cacacaagat ggagagagtg gtggtgatga
661 ccagtttccc gagcaggcag agctgtcagg gccagagggg atggacgaac tgatctccac
721 tccttcggtt gaggacaagt ctgaagagcc accaggcaca gagctccaga gggacacaga
781 ggcctcccac cttgctccca atcacaccac cttccctaag atccacagcc gcagattcag
841 ggattactgc agccagatgc ttagtaaaga agtggatgct tgtgttaccg acctactcaa
901 agaactggtc cgtttccaag accgtatgta ccagaaagat ccagtcaagg ccaagactaa
961 acgtcgactt gtgttggggt tgagggaggt tctcaaacac ctgaagctca aaaaactgaa
1021 atgtgtcatt atttctccca actgtgagaa gatacagtca aaaggtgggc tggatgacac
1081 tttgcacaca attattgatt atgcctgtga gcagaacatt ccctttgtgt ttgctctcaa
1141 ccgcaaagct ctggggcgca gtttgaataa ggcagttcct gtcagtgtgg tggggatctt
1201 cagctatgat ggggcccagg atcagttcca caagatggtt gagctgacag tggcggcccg
1261 acaggcgtac aagaccatgc tggagaatgt gcagcaggag ctggtgggag agcccaggcc
1321 tcaggcacct cccagcctac ccacacaggg ccccagctgc cctgcagaag atggcccccc
1381 agccctgaaa gaaaaagaag agccacacta cattgaaatc tggaaaaaac atctggaagc
1441 atacagtgga tgtaccctgg agctagaaga atccttggag gcttcaacct ctcaaatgat
1501 gaatttgaat ttatgagagt tcttgcctgt gtgtctgtat tttgggtaag gaggggaggt
1561 ctgaaaaaga ctttggggct ttttcttctg tttttcatga caatgtaatt tgtgtaactg
1621 ttgaatctgg aaattgatca gcattaaagg gcacatgaag cagtgtctgc aggcgttcag
1681 tgctgcggag cctgttaaag gtcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaa
//