LOCUS BC023000 1654 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane protein 86B, mRNA (cDNA clone MGC:30208
IMAGE:5000011), complete cds.
ACCESSION BC023000
VERSION BC023000.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1654)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1654)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31560865.
FEATURES Location/Qualifiers
source 1..1654
/db_xref="H-InvDB:HIT000050787"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:30208 IMAGE:5000011"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1654
/gene="TMEM86B"
/gene_synonym="MGC30208"
/db_xref="GeneID:255043"
/db_xref="HGNC:HGNC:28448"
CDS 524..1204
/gene="TMEM86B"
/gene_synonym="MGC30208"
/codon_start=1
/product="transmembrane protein 86B"
/protein_id="AAH23000.1"
/db_xref="GeneID:255043"
/db_xref="HGNC:HGNC:28448"
/translation="MDAGKAGQTLKTHCSAQRPDVCRWLSPFILSCCVYFCLWIPEDQ
LSWFAALVKCLPVLCLAGFLWVMSPSGGYTQLLQGALVCSAVGDACLIWPAAFVPGMA
AFATAHLLYVWAFGFSPLQPGLLLLIILAPGPYLSLVLQHLEPDMVLPVAAYGLILMA
MLWRGLAQGGSAGWGALLFTLSDGVLAWDTFAQPLPHARLVIMTTYYAAQLLITLSAL
RSPVPKTD"
BASE COUNT 274 a 562 c 475 g 343 t
ORIGIN
1 cctggtcacc cattgaagca gtgtttgtgg tggagcccct gagggcttgg tggggttgag
61 cagaatgagg aaaggtttca tggagcaggg agggagacgg ctagggcagc aagtgaagga
121 cagactcgcc ttcccatccc tccaggggca ctcctgccag ccagcccctc tcccgcttcc
181 catgatgggg tggctgttgg aattctgcac cccatctctt ctgattgttg gggcccagga
241 caaggggaca ggcatttgtg ggcctaacct ccccaggcag ataggaggag gaagccatgt
301 cccagcaggc tagggcagag ggacccccag tgccaacagt gctttatcag cgggcgccag
361 gcagggccat ccccagggtg aggacaacat ctccctgggc cctgttatca gtcacagagt
421 ccacaggacg ctccttgggt taacgtgtaa ccatgagccc tcccctccac cccctgaagc
481 cactcgctcc cagattaggt cgctctgggg ctatcaggcc agcatggacg ctggcaaagc
541 ggggcagacc ctgaagactc actgctcagc ccagcgccca gatgtctgca ggtggctgag
601 ccccttcatc ctctcctgct gcgtgtactt ctgcctctgg attcccgagg accagctgtc
661 ctggttcgct gccctggtca agtgcctgcc tgtcctctgc ctggctgggt tcctgtgggt
721 catgtcccca agcgggggct acacccagct cctccaggga gcccttgtgt gctcggctgt
781 gggggacgct tgcctcatct ggccggcagc cttcgtccct ggcatggccg cctttgccac
841 cgcccacctc ctctacgtct gggccttcgg cttctctccc ctgcagcccg gcctgctgct
901 gctcatcatc ctggcccctg gcccctacct cagccttgtg ctccagcacc tcgagccgga
961 tatggtcctg ccggtggcag cctatgggct gatcctgatg gccatgctgt ggcgcggcct
1021 ggcccagggc gggagtgccg gctggggcgc gctgctcttc acgctctctg atggcgtgct
1081 ggcctgggac accttcgccc agcccctgcc ccatgcccgc ctggtgatca tgaccaccta
1141 ctatgctgcc cagctcctca tcacactgtc agccctcagg agcccggtgc ccaagactga
1201 ctgactaggg agcttgaagg gccggtgttc aggccctctc ctcctgcaag gacctgggcc
1261 tcccagccca gcccagcctg agaaataccc tcagcagcga agcttcctga cgcctgtctg
1321 caggcgctgc tgccgccgtc gcttctggct gaagacgttt gaggacgatt tgcggaattc
1381 caagtccact actgggttcc agctgccttc ccccggttct gactccagat ccctggctcc
1441 tcagccaggc ccacatggag ccctcccagc caccagcctg cctccatgtt cactgtcggc
1501 cccacagcct gcccgccccc tgctgctgct ctgaatccgt tttccctgtg ggtgtggaac
1561 cgtagatgtt gctgttaccg taggagaggc ctcggggagg gtcatcattg tgataaacca
1621 tcgcggttaa tgacagcaga aaaaaaaaaa aaaa
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