LOCUS BC022989 2248 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens THAP domain containing 6, mRNA (cDNA clone MGC:30052
IMAGE:5113206), complete cds.
ACCESSION BC022989
VERSION BC022989.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2248)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2248)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC022989.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62821788.
FEATURES Location/Qualifiers
source 1..2248
/db_xref="H-InvDB:HIT000039689"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:30052 IMAGE:5113206"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2248
/gene="THAP6"
/gene_synonym="MGC30052"
/db_xref="GeneID:152815"
/db_xref="HGNC:HGNC:23189"
CDS 23..691
/gene="THAP6"
/gene_synonym="MGC30052"
/codon_start=1
/product="THAP domain containing 6"
/protein_id="AAH22989.1"
/db_xref="GeneID:152815"
/db_xref="HGNC:HGNC:23189"
/translation="MVKCCSAIGCASRCLPNSKLKGLTFHVFPTDENIKRKWVLAMKR
LDVNAAGIWEPKKGDVLCSRHFKKTDFDRSAPNIKLKPGVIPSIFDSPYHLQGKREKL
HCRKNFTLKTVPATNYNHHLVGASSCIEEFQSQFIFEHSYSVMDSPKKLKHKLDHVIG
ELEDTKESLRNVLDREKRFQKSLRKTIRELKDECLISQETANRLDTFCWDCCQESIEQ
DYIS"
BASE COUNT 766 a 361 c 400 g 721 t
ORIGIN
1 cgttttgtta tgagttgcta aaatggtgaa atgctgctcc gccattggat gtgcttctcg
61 ctgcttgcca aattcgaagt taaaaggact gacatttcac gtattcccca cagatgaaaa
121 catcaaaagg aaatgggtat tagcaatgaa aagacttgat gtgaatgcag ccggcatttg
181 ggagcctaaa aaaggagatg tgttgtgttc gaggcacttt aagaagacag attttgacag
241 aagtgctcca aatattaaac tgaaacctgg agtcatacct tctatctttg attctccata
301 tcacctacag gggaaaagag aaaaacttca ttgtagaaaa aacttcaccc tcaaaaccgt
361 tccagccact aactacaatc accatcttgt tggtgcttcc tcatgtattg aagaattcca
421 atcccagttc atttttgaac atagctacag tgtaatggac agtccaaaga aacttaagca
481 taaattagat catgtgatcg gcgagctaga ggatacaaag gaaagtctac ggaatgtttt
541 agaccgagaa aaacgttttc agaaatcatt gaggaagaca atcagggaat taaaggatga
601 atgtctgatc agccaagaaa cagcaaatag actggacact ttctgttggg actgttgtca
661 ggagagcata gaacaggact atatttcatg aaataatttc atgttacgtt ccacctaaaa
721 ttgtcattgg tacaaatttt tataaaatct catttaccat cactaaataa tatccatcat
781 ttaaagtgct gctttggatt ctctggagca ttatgcatta tagttgttat ccaaagactt
841 ttttgaaaat atgcagaaat ttgtggtaat tatgtatttg tgtcttgtga caattatgtt
901 ttatagacct acactagtgc caggtcacta ttgtaagatg ttaaaatctc aagaaaattt
961 cacagagcta aagaaatgat gtcaaattag tcacattaag ctatagtaga aggaattgga
1021 cacttctcca gatatttggc ttcaaaggag tacctttact tacatgtgct ttatggtaag
1081 tacattgaat tttactttaa atgcatttta ctacaaagca caattcattt gtaatgcata
1141 tccatcttgg attcaatcca aggtgcttta gctatcagta gtaccaaagg atctttttac
1201 aaggcttcct gtggtattga ctctgagaat aacacatagt gaagatctgt gggcttttaa
1261 aattgttcac agccaattta agaagacccc tcatgaagtc tcagttttca gtacagtaca
1321 tcattcctcc tcactaggag cactttgatg taaaccagaa tagctttaaa aagacaaaaa
1381 ggatcgtaga tctgattttt aaatggttgg ttgctttgac agatctgaac actttgcttc
1441 atgactattt cgtcataaag gtatatgttt aaaatctgaa tggcagtact agctctatac
1501 ttttaatact gctttgtatt ttatatgtaa agtagtattg ctgacatttt aaaaaaatac
1561 aaaatacaaa agaaaccatt agaaattaat aactgtggct cttccagttg aaataggaat
1621 tggagagaaa ggattagaat attttaatta ggggagtaga ttattgtcca aaggctttta
1681 tttagagaaa cgggtaatta aaacagcagc tttagaatag cttcttactg aatatgcaaa
1741 agaataattc cttgttattt cctaattgat ccaagtctca taaatttagc ttttgtcata
1801 attccttacc gaaaacaact gaaattgaga gtcataaata ctgtgggtta gaataaaaac
1861 catttgccaa agcaacactc tacttagaag cacatgtaca tacatggacc tcattcagaa
1921 gtccatgttg tagcagttag aatttgagta tcagccattt cattgtagta acaaaaattg
1981 aattgcattt tgtgctcagt tgtttattgt aattttattt ttgttacatt aatattagtt
2041 aagatatggt cacttgaatt ttttgtattt aagaattttc tgttttaatg catgttatac
2101 ttttatgtag gattccaaac cttccctcta aatgggattt aacccacatc tgcgagatca
2161 gcgttatgct aagaggaaat cactgaggcc atatcttttt acaatctgaa aaaaaagtag
2221 taaaaaggta gttaaaaaaa aaaaaaaa
//