LOCUS BC022964 2647 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 107, mRNA (cDNA clone
MGC:29875 IMAGE:5110673), complete cds.
ACCESSION BC022964
VERSION BC022964.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2647)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2647)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: m Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56711327.
FEATURES Location/Qualifiers
source 1..2647
/db_xref="H-InvDB:HIT000039683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29875 IMAGE:5110673"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2647
/gene="C1orf107"
/gene_synonym="DEF"
/gene_synonym="DJ434O14.5"
/gene_synonym="FLJ12704"
/gene_synonym="MGC29875"
/db_xref="GeneID:27042"
/db_xref="HGNC:HGNC:28440"
CDS 59..2329
/gene="C1orf107"
/gene_synonym="DEF"
/gene_synonym="DJ434O14.5"
/gene_synonym="FLJ12704"
/gene_synonym="MGC29875"
/codon_start=1
/product="chromosome 1 open reading frame 107"
/protein_id="AAH22964.1"
/db_xref="GeneID:27042"
/db_xref="HGNC:HGNC:28440"
/translation="MGKRGSRSQSQLLNTLTKKQKKHLRDFGEEHPFYDRVSRKEAKP
QICQLSESSDSSDSESDSESEPQQVSGYHRLLATLKNVSEEEEEDEEEEEEEDSIVDD
AEMNDEDGGSDVSVEEEMAAESTESPENVALSADPEGKEDGEEPPGTSQTSPEEFTDA
KHESLFSLETNFLEEESGDNSSLKASQDPFLQHVNKELKEKAIQAVATNPKTTHELKW
PILGQLFFSSKFQKLETFKPPKDIDLKSLHLQKPLESTWTKTNSQFLSGPQKSSSPFT
PLQKELFLIMNSYRDLFYPERTALKNGEEIRHVYCLHVINHILKANAQVLGNNSRRRS
QKFGVGDDDDFRDQGLTRPKVLIVVPFREAALRVVQLFISLLEGDSKKKIIVSNKKRF
QGEYGSDPEERPPNLKRPEDYEAVFVGNIDDHFRIGVAILQRSIRLYAPFYSSDILIA
SPLGLRTIIGGEGEKKRDFDFLSSIELLIIDQADIYLMQNWEHVLHLMNHMNLLPLDS
HGVDFSRVRMWSLNNWSKYYRQTLLFGALQDAQINSVFNKYCVNMQGQVAVRNVPMTG
SISHVLVQLPHVFQRMEAENLASVIDARFNFFVNKILPQYRDAVMSHTLIYIPSYFDF
VRLRNYFKKEELNFTHICEYTQKSGVSRARHFFLQGEKQFLLFTERFHFYKRYTIKGI
RNLIFYELPTYPHFYSEICNMLRATNRGEEATWTCTVLYSKYDAQRLAAVVGVERAAQ
MLQSNKNVHLFITGEK"
BASE COUNT 793 a 584 c 622 g 648 t
ORIGIN
1 gcaacttcct ggtggaaaac cgcgactctt gcaagtgggc aaacttgacg ttttcgctat
61 gggcaaacgc gggagccgga gccagagcca gctactcaac accctaacta aaaagcagaa
121 gaaacatctt cgagatttcg gcgaggagca tcccttctat gacagggttt ccagaaagga
181 agcaaagcca cagatttgtc agctgtcaga gagttcagat tcttcagatt ctgaaagcga
241 ctcagagagt gaaccacaac aagtttctgg ctaccacaga ctacttgcta cattaaagaa
301 tgtttctgag gaagaagagg aagatgagga ggaggaagag gaagaagaca gtattgtaga
361 tgatgcagaa atgaacgatg aagatggtgg tagcgatgtc agtgtggaag aagagatggc
421 tgcagagtct actgaaagtc cagagaatgt agctttatct gctgaccctg agggaaaaga
481 agatggggaa gagccaccgg gcacatcaca aacatccccc gaagagttca cagatgcaaa
541 acacgagtca ctgttcagcc tggaaaccaa ttttctggaa gaggaaagtg gagacaactc
601 ttctttgaaa gcctctcaag atccatttct tcaacatgtg aacaaagaac tgaaagaaaa
661 agcaattcag gctgttgcca caaatcccaa aactacccac gagcttaaat ggcctattct
721 gggccagctt ttcttttcct ctaagtttca gaagttggaa acatttaaac ccccaaagga
781 tattgactta aagtcacttc atctccagaa gcctctggaa tccacctgga ctaagaccaa
841 cagccagttc ctatctggtc cccaaaaatc aagcagccca ttcacccccc tccagaaaga
901 actcttctta attatgaatt cttaccggga cctgttctac ccggaaagga ctgctctgaa
961 gaacggggaa gagatccgcc atgtgtattg cctgcatgtg ataaatcaca tcctcaaagc
1021 caatgcccag gtgcttggca acaatagcag acgccgaagc cagaagtttg gagtgggtga
1081 tgatgatgac ttcagagacc aagggttaac aaggcccaag gtactgatag tggtgccatt
1141 ccgggaagct gctttgcggg tggtgcagct cttcatcagc ctcctcgagg gtgacagcaa
1201 gaagaaaatc attgtgagca acaaaaagag gtttcaggga gaatatggat cagatcccga
1261 ggagagacca cccaacttga agaggcctga ggattatgaa gccgtatttg tgggcaatat
1321 tgatgaccac ttcaggattg gagtggcaat acttcagaga agcatccgac tctatgcccc
1381 gttttactcc tcggatatcc tcattgcttc ccccctgggc ttgaggacca tcattggtgg
1441 agaaggagag aagaagagag attttgactt tctgtcttct atcgagcttc tcatcattga
1501 tcaagctgac atttacctga tgcagaactg ggagcatgtc ctgcatttga tgaatcacat
1561 gaacctacta cccctggact cacatggggt agacttttct cgagtgcgga tgtggagcct
1621 caataattgg tccaagtact atcgccagac actgctattt ggggcccttc aggatgccca
1681 gatcaactca gtgttcaaca agtactgtgt caacatgcaa ggccaggtgg ccgtgaggaa
1741 tgtcccaatg acaggctcta tcagtcatgt cctggtgcag ctcccacatg tcttccagag
1801 gatggaagct gaaaacctag cttcagtgat tgatgccagg tttaactttt ttgtgaacaa
1861 gattttgcca cagtatcgtg atgcagtcat gtctcacacg ctcatctata tcccctccta
1921 ctttgacttc gtgcgtcttc gaaattactt caagaaggag gaattgaatt ttacccacat
1981 ctgcgagtac acgcagaagt ctggtgtctc cagggccaga cacttcttcc ttcaaggaga
2041 gaaacagttt ctacttttca cagagcgctt ccatttctac aaaaggtata caataaaagg
2101 catcaggaac ctgattttct atgaactgcc gacatatcca cacttttaca gtgaaatctg
2161 taatatgctg agagccacca acagaggaga agaggccacg tggacctgca ctgttctcta
2221 ctccaaatat gatgcccaga ggttagctgc cgtggttggt gtggagcggg cggcacagat
2281 gctacagtcc aacaagaatg tccacctctt cattactgga gaaaaatgaa attttgttgg
2341 gcaggaagtg gtatttggca tgatacataa tgtttgattc tatgccattt ggacccaatt
2401 ctgattactt acagaagaag gactgataca aagaaagtgc atgaggcaat gtcagtatta
2461 tctgacatct ttcttttcag gtcatgtgtc cctgaaaagt taaatgtaaa ccagattttg
2521 gtaaatccca tctttcagaa gtgaagaggg ggctagaagg actctgagaa gttggtagaa
2581 gaaaactccc acttgtgaat atttttgtga gacataaatt cttttattac gaaaaaaaaa
2641 aaaaaaa
//