LOCUS BC022890 2324 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptosomal-associated protein, 23kDa, mRNA (cDNA
clone MGC:27295 IMAGE:4658930), complete cds.
ACCESSION BC022890
VERSION BC022890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2324)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2324)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18765728.
FEATURES Location/Qualifiers
source 1..2324
/db_xref="H-InvDB:HIT000039675"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27295 IMAGE:4658930"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2324
/gene="SNAP23"
/gene_synonym="HsT17016"
/gene_synonym="SNAP23A"
/gene_synonym="SNAP23B"
/db_xref="GeneID:8773"
/db_xref="HGNC:HGNC:11131"
/db_xref="MIM:602534"
CDS 79..714
/gene="SNAP23"
/gene_synonym="HsT17016"
/gene_synonym="SNAP23A"
/gene_synonym="SNAP23B"
/codon_start=1
/product="synaptosomal-associated protein, 23kDa"
/protein_id="AAH22890.1"
/db_xref="GeneID:8773"
/db_xref="HGNC:HGNC:11131"
/db_xref="MIM:602534"
/translation="MDNLSSEEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITM
LDEQKEQLNRIEEGLDQINKDMRETEKTLTELNKCCGLCVCPCNRTKNFESGKAYKTT
WGDGGENSPCNVVSKQPGPVTNGQLQQPTTGAASGGYIKRITNDAREDEMEENLTQVG
SILGNLKDMALNIGNEIDAQNPQIKRITDKADTNRDRIDIANARAKKLIDS"
BASE COUNT 694 a 433 c 482 g 715 t
ORIGIN
1 gggggccagg tccggtgttg gggtgtccga gttgccgccg gagaggagtg gcctcgcccg
61 cttgagtttt gattcatcat ggataatctg tcatcagaag aaattcaaca gagagctcac
121 cagattactg atgagtctct ggaaagtacg aggagaatcc tgggtttagc cattgagtct
181 caggatgcag gaatcaagac catcactatg ctggatgaac aaaaggaaca actaaaccgc
241 atagaagaag gcttggacca aataaataag gacatgagag agacagagaa gactttaaca
301 gaactcaaca aatgctgtgg cctttgtgtc tgcccatgta atagaacaaa gaactttgag
361 tctggcaagg cttataagac aacatgggga gatggtggag aaaactcacc ttgcaatgta
421 gtatctaaac agccaggccc ggtgacaaat ggtcagcttc agcaaccaac aacgggagca
481 gccagtggtg gatacattaa acgcataact aatgatgcca gagaagatga aatggaagag
541 aacctgactc aagtgggcag tatcctggga aatctaaaag acatggccct gaacataggc
601 aatgagattg atgctcaaaa tccacaaata aaacgaatca cagacaaggc tgacaccaac
661 agagatcgta ttgatattgc caatgccaga gcaaagaaac tcattgacag ctaaagctac
721 tgctgttctt ctttatcatt tattcacttc cgtagctcct ccttgaaagt tattaccttt
781 tcagagttta agttttcggt tccacgctct tctaattggg agataatatg gaagaagggc
841 cagaagcagt tacagccctc cttctttttt gttttctgtt gagggccgac tgctgctctg
901 ccttccttct agtattttct ttctcaattc atacgcttag attggttttc atatgtcatg
961 tttagtgttt tcatcctcct catatacttc agcaggttct tttgctttca agatttggaa
1021 gcattgccaa agacagccat gaagaaggaa gctgtagagg tgttttttgt tgttgtttat
1081 ttttgctttt gtggttgagg gaaggacaag agataagagg ttgttacctc agtaaaaacc
1141 ttcaggccac aaagcaaaaa gttgcatagc cacaacgaag atctagttgg atatagtttt
1201 tgatttaagt tgcagttata gccaatttag gctaatgctt ggttttggag cttttataca
1261 caacgttttt gttaggcatc acagttttgc aacctctgct ccaaagagaa aaatagaatg
1321 agttttcttt cttttttttt tttttggagt cagagtctcg ctctcttgtc caggctggag
1381 tgcaatagcg cgatctgggc tcactgcaac ctccgcctcc ctggttcaag caattctcct
1441 gccttgcctc ctgagtagct gggattacag gcgtgtgtca ccacgctcgg ctaatttttg
1501 tatttttagt agagacaggg tttcaccatg tcaagctggt cttggactcc tgacgtcgtg
1561 atccacccgc cttggcctcc caaagtactg ggattacagg cgtgagccac tgtgcctggc
1621 tgagttttct taaagtgagc ttaatttctg aactcttagt gattcatata tgtacataaa
1681 tctgtgatcc catttcttat tgcaccattc aggaacactt tatataaatg agtggctttt
1741 tatttcatat tattagtagt atcatggttc cattacaggc ctattaacat catacattgt
1801 cattagtctt tgaagaaaaa atatgtaaat atatatgtgt aacatgagaa tttctctcta
1861 aagcagggct taaaattttt tggaaaagtt tgacaaagca taccacatga attcagattt
1921 acctcaatgc taagaattat gtttagttag gaaaaaggaa agtcattttg acctcaggta
1981 gaaaaataga ttgctttgag ttttatgtag ctttagactt taaaaagtta gaatttattc
2041 tgtaactaaa aattatttga aaaaattatg cctctggttt aattattggt gattacacac
2101 tctttctctt acccttgtgt attgaactat gtccataatc aagttgatgt ggatcctgaa
2161 aagtgttatg aacatctgat tggtatttgt cacatttatt ttaaaattag catctgaaca
2221 cttcaaagct gtcagtgtgt attggtttca ccaataacca ctgcttgatc cttacaatta
2281 aattttttaa ctagcaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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