LOCUS BC022855 2362 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH3KBP1 binding protein 1, mRNA (cDNA clone MGC:22658
IMAGE:4102901), complete cds.
ACCESSION BC022855
VERSION BC022855.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2362)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2362)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923916.
FEATURES Location/Qualifiers
source 1..2362
/db_xref="H-InvDB:HIT000039656"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22658 IMAGE:4102901"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2362
/gene="SHKBP1"
/gene_synonym="PP203"
/gene_synonym="Sb1"
/db_xref="GeneID:92799"
/db_xref="HGNC:HGNC:19214"
CDS 21..2144
/gene="SHKBP1"
/gene_synonym="PP203"
/gene_synonym="Sb1"
/codon_start=1
/product="SH3KBP1 binding protein 1"
/protein_id="AAH22855.1"
/db_xref="GeneID:92799"
/db_xref="HGNC:HGNC:19214"
/translation="MAAAATAAEGVPSRGPPGEVIHLNVGGKRFSTSRQTLTWIPDSF
FSSLLSGRISTLKDETGAIFIDRDPTVFAPILNFLRTKELDPRGVHGSSLLHEAQFYG
LTPLVRRLQLREELDRSSCGNVLFNGYLPPPVFPVKRRNRHSLVGPQQLGGRPAPVRR
SNTMPPNLGNAGLLGRMLDEKTPPSPSGQPEEPGMVRLVCGHHNWIAVAYTQFLVCYR
LKEASGWQLVFSSPRLDWPIERLALTARVHGGALGEHDKMVAAATGSEILLWALQAEG
GGSEIGVFHLGVPVEALFFVGNQLIATSHTGRIGVWNAVTKHWQVQEVQPITSYDAAG
SFLLLGCNNGSIYYVDVQKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDSG
NWIEIAYGTSSGGVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADN
NHVRTWSVTRFRGMISTQPGSTPLASFKILALESADGHGGCSAGNDIGPYGERDDQLV
FIQKVVPSASQLFVRLSSTGQRVCSVRSVDGSPTTAFTVLECEGSRRLGSRPRRYLLT
GQANGSLAMWDLTTAMDGLGQAPAGGLTEQELMEQLEHCELAPPAPSAPSWGCLPSPS
PRISLTSLHSASSNTSLSGHRGSPSPPQAEARRRGGGSFVERCQELVRSGPDLRRPPT
PAPWPSSGLGTPLTPPKMKLNETSF"
BASE COUNT 452 a 771 c 684 g 455 t
ORIGIN
1 ggggggctcg cccgggggcc atggcagcag cggctactgc agccgagggg gtccccagtc
61 gggggcctcc cggggaagtc atccatctga atgtgggagg caagagattc agtacctctc
121 gccagactct cacctggatc ccagactcct tcttctccag tcttctgagc ggacgcatct
181 cgacgctgaa agatgagacc ggagcaatct tcatcgacag ggaccctaca gtcttcgccc
241 ccatcctcaa cttcctgcgc accaaagagt tggatcccag gggtgtccac ggttccagcc
301 tcctccatga agcccagttc tatgggctca ctcctctggt tcgtcgcctg cagcttcgag
361 aggagttgga tcgatcttct tgtggaaacg tcctcttcaa tggttacctg ccgccaccag
421 tgttcccagt gaagcggcgg aaccggcaca gcctagtggg gcctcagcag ctaggaggac
481 ggccagcccc tgtccgacgg agcaacacga tgccccccaa ccttggcaat gcagggctgc
541 tgggccgaat gctggatgag aaaacccctc cctcaccctc aggacaacct gaggagccgg
601 ggatggtgcg cctggtgtgt ggacaccata attggatcgc tgtggcctat acccagtttc
661 tagtctgcta caggttgaag gaagcctctg gctggcagct ggtgttttcc agcccccgcc
721 tggactggcc catcgaacga ctggcgctca cagcccgggt gcatggtggg gctttgggtg
781 aacatgacaa gatggtggca gcagccaccg gcagcgagat cctgctatgg gctctgcagg
841 cggaaggcgg tggctccgag ataggggtct ttcatctggg ggtgcctgtg gaggccttgt
901 tcttcgtcgg gaaccagctc attgctacaa gccacacagg gcgcatcggg gtgtggaatg
961 ccgtcaccaa gcactggcag gtccaggagg tgcagcccat caccagttat gacgcggcag
1021 gctccttcct cctcctgggc tgcaacaacg gctccattta ctacgtggat gtgcagaagt
1081 tccccttgcg catgaaagac aacgacctcc ttgtcagcga gctctatcgg gacccagcgg
1141 aggatggggt caccgccctc agtgtctacc tcacccccaa gaccagtgac agtgggaact
1201 ggatcgagat cgcctatggc accagctcag ggggcgtgcg ggtcatcgtg cagcacccgg
1261 agactgtggg ctcggggcct cagctcttcc agaccttcac tgtgcaccgc agccctgtca
1321 ccaagatcat gctgtcggag aagcacctca tctcagtctg tgccgacaac aaccacgtgc
1381 ggacatggtc tgtgactcgc ttccgcggca tgatttccac ccagcccggc tccaccccac
1441 tcgcttcctt taagatcctg gctctggagt cggcagatgg gcatggcggc tgcagtgctg
1501 gcaatgacat tggcccctac ggtgagcggg acgaccagct agtgttcatc cagaaggtgg
1561 tgcccagtgc cagccagctc ttcgtgcgtc tctcatctac tgggcagcgg gtgtgctccg
1621 tgcgctccgt ggacggctca cccacgacgg ccttcacagt gctggagtgc gagggctccc
1681 ggcggctcgg ctctcggccc cggcgctacc tgctcactgg ccaggccaac ggcagcttgg
1741 ccatgtggga cctaaccacc gccatggacg gcctcggcca ggcccctgca ggtggcctga
1801 cggagcaaga gctgatggaa cagctggaac actgtgagct ggccccgccg gctccttcag
1861 ctccctcatg gggctgtctc cccagcccct caccccgcat ctccctcacc agcctccact
1921 cagcctccag caacacctcc ttgtctggcc accgtgggag cccaagcccc ccgcaggctg
1981 aggcccggcg ccgtggtggg ggcagctttg tggaacgctg ccaggaactg gtgcggagtg
2041 ggccagacct ccgacggcca cccacaccag ccccgtggcc ctccagcggt ctcggcactc
2101 ccctcacacc tcccaagatg aagctcaatg aaacttcctt ttgaacaacg cagctgccat
2161 gatgccttgg gatgccctgg tcctggggga ctcaggtgcc tccctgattc ctgtgggaac
2221 cccgggttca gggccagggc ctccttggaa taaatggtta ttgttactag gtccccacct
2281 tccctctttt ctggaagcca aagtcagcct ccccaataaa gtcctcactg cctaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aa
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