LOCUS BC022806 747 bp mRNA linear HUM 20-DEC-2004 DEFINITION Homo sapiens lymphocyte antigen 6 complex, locus D, mRNA (cDNA clone IMAGE:5429968), partial cds. ACCESSION BC022806 VERSION BC022806.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 747) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 747) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: o Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 49574517. FEATURES Location/Qualifiers source 1..747 /db_xref="H-InvDB:HIT000090664" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5429968" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene <1..747 /gene="LY6D" /gene_synonym="E48" /db_xref="GeneID:8581" /db_xref="MIM:606204" CDS <1..390 /gene="LY6D" /gene_synonym="E48" /codon_start=1 /product="LY6D protein" /protein_id="AAH22806.1" /db_xref="GeneID:8581" /db_xref="MIM:606204" /translation="EMRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSR FCKTTNTVEPLRGNLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAP TRTALAHSALSLGLALSLLAVILAPSL" BASE COUNT 168 a 245 c 197 g 137 t ORIGIN 1 gagatgagga cagcattgct gctccttgca gccctggctg tggctacagg gccagccctt 61 accctgcgct gccacgtgtg caccagctcc agcaactgca agcattctgt ggtctgcccg 121 gccagctctc gcttctgcaa gaccacgaac acagtggagc ctctgagggg gaatctggtg 181 aagaaggact gtgcggagtc gtgcacaccc agctacaccc tgcaaggcca ggtcagcagc 241 ggcaccagct ccacccagtg ctgccaggag gacctgtgca atgagaagct gcacaacgct 301 gcacccaccc gcaccgccct cgcccacagt gccctcagcc tggggctggc cctgagcctc 361 ctggccgtca tcttagcccc cagcctgtga ccttcccccc agggaaggcc cctcatgcct 421 ttccttccct ttctctgggg attccacacc tctcttcccc agccgcaacg ggggtgccag 481 gagccccagg ctgagggctt ccccgaaagt ctgggaccag gtccaggtgg gcatggaatg 541 ctgatgactt ggagcaggcc ccacagaccc cacagaggat gaagccaccc cacagaggat 601 gcagccccca gctgcatgga aggtggagga cagaagccct gtggatcccc ggatttcaca 661 ctcctgtttt gttgccgttt atttttgtac tcaaatctct acatggagat aaatgattta 721 aaccagaaaa aaaaaaaaaa aaaaaaa //