LOCUS BC022783 3611 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens ubiquitin specific peptidase 34, mRNA (cDNA clone
IMAGE:3846921), partial cds.
ACCESSION BC022783
VERSION BC022783.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3611)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3611)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: h Column: 10.
FEATURES Location/Qualifiers
source 1..3611
/db_xref="H-InvDB:HIT000090654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3846921"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3611
/gene="USP34"
/gene_synonym="KIAA0570"
/gene_synonym="KIAA0729"
/db_xref="GeneID:9736"
CDS <1..2962
/gene="USP34"
/gene_synonym="KIAA0570"
/gene_synonym="KIAA0729"
/codon_start=2
/product="USP34 protein"
/protein_id="AAH22783.1"
/db_xref="GeneID:9736"
/translation="INIRQTCNLIFSLCRYNNRLAEHIVSMLFTSIAKLTPEAANPFF
KLLTMLMEFAGGPPGMPPFASYILQRIWEVIEYNPSQCLDWLAVQTPRNKLAHSWVLQ
NMENWVERFLLAHNYPRVRTSAAYLLVSLIPSNSFRQMFRSTRSLHIPTRDLPLSPDT
TVVLHQVYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLMFSTYFMD
LWNLFQPKLSEPAIATNHNKQALLSFWYNVCADCPENIRLIVQNPVVTKNIAFNYILA
DHDDQDVVLFNRGMLPAYYGILRLCCEQSPAFTRQLASHQNIQWAFKNLTPHASQYPG
AVEELFNLMQLFIAQRPDMREEELEDIKQFKKTTISCYLRCLDGRSCWTTLISAFRIL
LESDEDRLLVVFNRGLILMTESFNTLHMMYHEATACHVTGDLVELLSIFLSVLKSTRP
YLQRKDVKQALIQWQERIEFAHKLLTLLNSYSPPELRNACIDVLKELVLLSPHDFLHT
LVPFLQHNHCTYHHSNIPMSLGPYFPCRENIKLIGGKSNIRPPRPELNMCLLPTMVET
SKGKDDVYDRMLLDYFFSYHQFIHLLCRVAINCEKFTETLVKLSVLVAYEGLPLHLAL
FPKLWTELCQTQSAMSKNCIKLLCEDPVFAEYIKCILMDERTFLNNNIVYTFMTHFLL
KVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKASASLNGDLRALALLL
SVHTPKQLNPALIPTLQELLSKCRTCLQQRNSLQEQEAKERKTKDDEGATPIKRRRVS
SDEEHTVDSCISDMKTETREVLTPTSTSDNETRDSSIIDPGTEQDLPSPENSSVKEYR
MEVPSSFSEDMSNIRSQHAEEQSNNGRYDDCKEFKDLHCSKDSTLAEEESEFPSTSIS
AVLSDLADLRSCDGQALPSQDPEVALSLSCGHSRGLFSHMQQHDILDTLCRTIESTIH
VVTRISGKGNQAAS"
BASE COUNT 1043 a 781 c 695 g 1092 t
ORIGIN
1 catcaatata agacaaactt gtaatctgat tttcagcctg tgtcgataca ataatcgact
61 tgcagaacat attgtatcta tgcttttcac atcaatagca aagttgactc ctgaggcagc
121 caatcctttc tttaagttgt tgactatgct aatggagttt gctggtggac ctccaggaat
181 gcctcccttt gcatcttata ttctgcagag gatatgggag gtgattgaat acaatccttc
241 tcagtgtcta gattggttgg cagtgcagac accccgaaat aaactggcac acagctgggt
301 cttacagaat atggaaaact gggtcgagcg gtttcttttg gctcacaatt atcctagagt
361 gaggacttct gcagcttatc ttctggtgtc ccttatacca agcaattcat tccgtcagat
421 gttccggtca acaaggtctt tgcacatccc aacccgtgac cttccactca gtccagacac
481 aacagtagtc ctacatcagg tctacaacgt gctccttggt ttgctctcaa gagccaaact
541 ttatgttgat gctgctgttc atggcactac aaagctagtg ccctatttta gctttatgac
601 ttactgttta atttccaaaa ctgagaagct gatgttttcc acatatttca tggatttgtg
661 gaaccttttc cagcctaaac tttctgagcc agcaatagct acaaatcaca ataaacaggc
721 tttgctttca ttttggtaca atgtctgtgc tgactgtcca gagaatatcc gccttattgt
781 tcagaaccca gtggtaacca agaacattgc cttcaattac atccttgctg accatgatga
841 tcaggatgtg gtgcttttta accgtgggat gctgccagcg tactatggca ttctgaggct
901 ctgctgtgag cagtctcctg cattcacacg acaactggct tctcaccaga acatccagtg
961 ggcctttaag aatcttacac cacatgccag ccaataccct ggagcagtag aagaactgtt
1021 taacctgatg cagctgttta tagctcagag gccagatatg agagaagaag aattagaaga
1081 tattaaacag ttcaagaaaa caaccataag ttgttactta cgttgcttag atggccgctc
1141 ctgctggact actttaataa gtgccttcag aatactatta gaatctgatg aagacagact
1201 tcttgttgta tttaatcgag gattgattct aatgacagag tctttcaaca ctttgcacat
1261 gatgtatcac gaagctacag cttgccatgt gactggagat ttagtagaac ttctgtcaat
1321 atttctttcg gttttgaagt ctacacgccc ttatcttcag agaaaagatg tgaaacaagc
1381 attaatccag tggcaggagc gaattgaatt tgcccataaa ctgttaactc ttcttaattc
1441 ctatagtcct ccagaactta gaaatgcctg tatagatgtc ctcaaggaac ttgtactttt
1501 gagtccccat gattttcttc atactctggt tccctttcta caacacaacc attgtactta
1561 ccatcacagt aatataccaa tgtctcttgg accttatttc ccttgtcgag aaaatatcaa
1621 gctaatagga gggaaaagca atattcggcc tccgcgccct gaactcaata tgtgcctctt
1681 gcccacaatg gtggaaacca gtaagggcaa agatgacgtt tatgatcgta tgctgctaga
1741 ctacttcttt tcttatcatc agttcatcca tctattatgc cgagttgcaa tcaactgtga
1801 aaaatttact gaaacattag ttaagctgag tgtcctagtt gcctatgaag gtttgccact
1861 tcatcttgca ctgttcccca aactttggac tgagctatgc cagactcagt ctgctatgtc
1921 aaaaaactgc atcaagcttt tgtgtgaaga tcctgttttc gcagaatata ttaaatgtat
1981 cctaatggat gaaagaactt ttttaaacaa caacattgtc tacacgttca tgacacattt
2041 ccttctaaag gttcaaagtc aagtgttttc tgaagcaaac tgtgccaatt tgatcagcac
2101 tcttattaca aacttgataa gccagtatca gaacctacag tctgatttct ccaaccgagt
2161 tgaaatttcc aaagcaagtg cttctttaaa tggggacctg agggcactcg ctttgctcct
2221 gtcagtacac actcccaaac agttaaaccc agctctaatt ccaactctgc aagagctttt
2281 aagcaaatgc aggacttgtc tgcaacagag aaactcactc caagagcaag aagccaaaga
2341 aagaaaaact aaagatgatg aaggagcaac tcccattaaa aggcggcgtg ttagcagtga
2401 tgaggagcac actgtagaca gctgcatcag tgacatgaaa acagaaacca gggaggtcct
2461 gaccccaacg agcacttctg acaatgagac cagagactcc tcaattattg atccaggaac
2521 tgagcaagat cttccttccc ctgaaaatag ttctgttaaa gaataccgaa tggaagttcc
2581 atcttcgttt tcagaagaca tgtcaaatat caggtcacag catgcagaag aacagtccaa
2641 caatggtaga tatgacgatt gtaaagaatt taaagacctc cactgttcca aggattctac
2701 cctagctgag gaagaatctg agttcccttc tacttctatc tctgcagttc tgtctgactt
2761 agctgacttg agaagctgtg atggccaagc tttgccctcc caggaccctg aggttgcttt
2821 atctctcagt tgtggccatt ccagaggact ctttagtcat atgcagcaac atgacatttt
2881 agataccctg tgtaggacca ttgaatctac aatccatgtc gtcacaagga tatctggcaa
2941 aggaaaccaa gctgcttctt gacattaggt gtagcatgtc tacttttaag tccctcaccc
3001 ccaaccccca tgctgtttgt ataagttttg cttatttgtt tttgtgcttc agtttgtcca
3061 gtgctctctg cttgaatggc aagatagatt tataggctta attcttggtc aggcagaact
3121 ccagatgaaa aaaacttgca tcttcagtat acttcctaaa gggcaatcag ataatggata
3181 tgttttatgt aattaagagt tcactttagt ggctttcatt taatatggct gtctgggaag
3241 aacagggttg cctagccctg tacaatgtaa tttaaactta cagcattttt actgtgtatg
3301 atatggtgtc ctctgtgcca gttttgtacc ttatagaggc agattgcctc cgatcgctgt
3361 ggttcttatt atcaaaatta agtttacttg tatacggaac aaccacaaga aatttgattc
3421 tgtaaagaat cctctttagc tgtggcctgg cagtatataa atggtgcttt atttaacaga
3481 atacctgtgg aggaaataaa gcacacttga tgtaaaaata attgttttat ttttattgac
3541 atgactgatt gattgctatt ctgtgcactt aattaaactg attgtgatga cttttcaaaa
3601 aaaaaaaaaa a
//