LOCUS       BC022570                1662 bp    mRNA    linear   HUM 11-SEP-2007
DEFINITION  Homo sapiens chromosome 5 open reading frame 40, mRNA (cDNA clone
            MGC:27121 IMAGE:4793169), complete cds.
ACCESSION   BC022570
VERSION     BC022570.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1662)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 32 Row: b Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 47716515.
FEATURES             Location/Qualifiers
     source          1..1662
                     /db_xref="H-InvDB:HIT000039631"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:27121 IMAGE:4793169"
                     /tissue_type="Brain, hypothalamus"
                     /clone_lib="NIH_MGC_96"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..1662
                     /gene="C5orf40"
                     /db_xref="GeneID:408263"
                     /db_xref="HGNC:HGNC:33547"
     CDS             141..815
                     /gene="C5orf40"
                     /codon_start=1
                     /product="chromosome 5 open reading frame 40"
                     /protein_id="AAH22570.1"
                     /db_xref="GeneID:408263"
                     /db_xref="HGNC:HGNC:33547"
                     /translation="MNIEVGNISYTGAIISWSSSEPCLEDYYHIMYRPNWNSIFSGYL
                     RYSFHNEEKVPRTISSVVLEHLAPSTLYFLCISCKKAAFPYRHYCTMFHTLDKSPLAP
                     GSSLVDPQISLWVLMAILLACFTAVLAFICLQFWCVRCHEPRWSYRAGHMEEANGLVR
                     WPEEAPDLGQREEDLQGLPLVEMPRKNSRDGAELDPEANQDAPDAGALQRGGGDPPAI
                     LPHCGE"
BASE COUNT          462 a          396 c          392 g          412 t
ORIGIN      
        1 tggggattac tcagtgttga gagaaacaac acggaaagcc cagagcagag gagggagaag
       61 gccccattct ctcagcttta atctactgca cctcggaggg cagagctcta accagacacg
      121 ctgcaagcat cagaatcggg atgaacatcg aggtggggaa catttcttat acaggagcca
      181 tcatctcctg gtcgtcctcg gagccctgcc tggaggacta ttaccatatt atgtacaggc
      241 ccaactggaa cagcatcttc tctggctatc ttcgctacag cttccacaac gaggagaagg
      301 tgcctcgaac gatcagctcc gtggtgctgg aacatcttgc cccttccact ctctacttcc
      361 tgtgcatcag ctgtaagaag gctgccttcc cttacaggca ctactgcacc atgttccaca
      421 ccctggataa gagtccgctg gctcctggaa gctccctggt agacccccag atctcccttt
      481 gggtgctgat ggccattctg ctggcctgct tcacagccgt cttggccttc atctgcctcc
      541 agttctggtg tgtccgttgc catgagccgc gatggtctta cagggctggc cacatggagg
      601 aggccaatgg gttggtgaga tggccagagg aggccccgga tcttggtcag agggaggaag
      661 acctgcaggg gctccccctg gtggaaatgc cacgcaagaa ctccagagat ggagctgaac
      721 tggatcccga agccaaccag gatgcccctg atgcgggtgc cttacagagg gggggtggtg
      781 acccacccgc tatactgcct cattgtgggg aatgagagtg gggaggagag cgcccgcatc
      841 atgtagccta aagctttcca cacagtaggt cgtttgtaca aatgtgtcta tagactaccc
      901 atttctctcc catcaaacgt cactgctatt gtaggtcacc tgggttggat gaatgcccca
      961 tgacaaagct tctcaagctg gaaaatgtat cccccagggt atgccaaggc acaaacgagg
     1021 catctcagca gcagcgtcca ctcggaggac acagttaaga attgaaagca ttgttttaac
     1081 attaaaacaa acatggatat gttataaagt agaaagcaaa aatttgcatg acttaaataa
     1141 aacacagcac ttgaaggaaa cacttgagtt acaagtaggc tctcagaggt acacttttgg
     1201 gcaaaggtag atgtccagtt tcctctgccc ttgaggggat tatttggaaa taatttggga
     1261 ttatttggaa ataatttgtg agaacccttg ctctggagtg ttttccaact tttaggcaat
     1321 cacataccac cgctctctat tttttaaaac catggattat cttcactatt attaataata
     1381 ctttccttta aattgactca ttttttaagc gtaaacttat tttcaaagac agccttatat
     1441 tactccataa gtgaaaaacc agcaccctcc tgctgcaaac agaagggaag agacataaga
     1501 ataaacatca tgaaaacaag ataatattaa ataatctgac ttagcttcta ttgcctgcca
     1561 gtgattctga gcttaatgcc tgcttgcttg tctttgataa aaagggagat ccagtgttgg
     1621 agaggtaata aagacatatt agcaccaaaa aaaaaaaaaa aa
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