LOCUS BC022570 1662 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens chromosome 5 open reading frame 40, mRNA (cDNA clone MGC:27121 IMAGE:4793169), complete cds. ACCESSION BC022570 VERSION BC022570.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1662) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1662) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: b Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47716515. FEATURES Location/Qualifiers source 1..1662 /db_xref="H-InvDB:HIT000039631" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:27121 IMAGE:4793169" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1662 /gene="C5orf40" /db_xref="GeneID:408263" /db_xref="HGNC:HGNC:33547" CDS 141..815 /gene="C5orf40" /codon_start=1 /product="chromosome 5 open reading frame 40" /protein_id="AAH22570.1" /db_xref="GeneID:408263" /db_xref="HGNC:HGNC:33547" /translation="MNIEVGNISYTGAIISWSSSEPCLEDYYHIMYRPNWNSIFSGYL RYSFHNEEKVPRTISSVVLEHLAPSTLYFLCISCKKAAFPYRHYCTMFHTLDKSPLAP GSSLVDPQISLWVLMAILLACFTAVLAFICLQFWCVRCHEPRWSYRAGHMEEANGLVR WPEEAPDLGQREEDLQGLPLVEMPRKNSRDGAELDPEANQDAPDAGALQRGGGDPPAI LPHCGE" BASE COUNT 462 a 396 c 392 g 412 t ORIGIN 1 tggggattac tcagtgttga gagaaacaac acggaaagcc cagagcagag gagggagaag 61 gccccattct ctcagcttta atctactgca cctcggaggg cagagctcta accagacacg 121 ctgcaagcat cagaatcggg atgaacatcg aggtggggaa catttcttat acaggagcca 181 tcatctcctg gtcgtcctcg gagccctgcc tggaggacta ttaccatatt atgtacaggc 241 ccaactggaa cagcatcttc tctggctatc ttcgctacag cttccacaac gaggagaagg 301 tgcctcgaac gatcagctcc gtggtgctgg aacatcttgc cccttccact ctctacttcc 361 tgtgcatcag ctgtaagaag gctgccttcc cttacaggca ctactgcacc atgttccaca 421 ccctggataa gagtccgctg gctcctggaa gctccctggt agacccccag atctcccttt 481 gggtgctgat ggccattctg ctggcctgct tcacagccgt cttggccttc atctgcctcc 541 agttctggtg tgtccgttgc catgagccgc gatggtctta cagggctggc cacatggagg 601 aggccaatgg gttggtgaga tggccagagg aggccccgga tcttggtcag agggaggaag 661 acctgcaggg gctccccctg gtggaaatgc cacgcaagaa ctccagagat ggagctgaac 721 tggatcccga agccaaccag gatgcccctg atgcgggtgc cttacagagg gggggtggtg 781 acccacccgc tatactgcct cattgtgggg aatgagagtg gggaggagag cgcccgcatc 841 atgtagccta aagctttcca cacagtaggt cgtttgtaca aatgtgtcta tagactaccc 901 atttctctcc catcaaacgt cactgctatt gtaggtcacc tgggttggat gaatgcccca 961 tgacaaagct tctcaagctg gaaaatgtat cccccagggt atgccaaggc acaaacgagg 1021 catctcagca gcagcgtcca ctcggaggac acagttaaga attgaaagca ttgttttaac 1081 attaaaacaa acatggatat gttataaagt agaaagcaaa aatttgcatg acttaaataa 1141 aacacagcac ttgaaggaaa cacttgagtt acaagtaggc tctcagaggt acacttttgg 1201 gcaaaggtag atgtccagtt tcctctgccc ttgaggggat tatttggaaa taatttggga 1261 ttatttggaa ataatttgtg agaacccttg ctctggagtg ttttccaact tttaggcaat 1321 cacataccac cgctctctat tttttaaaac catggattat cttcactatt attaataata 1381 ctttccttta aattgactca ttttttaagc gtaaacttat tttcaaagac agccttatat 1441 tactccataa gtgaaaaacc agcaccctcc tgctgcaaac agaagggaag agacataaga 1501 ataaacatca tgaaaacaag ataatattaa ataatctgac ttagcttcta ttgcctgcca 1561 gtgattctga gcttaatgcc tgcttgcttg tctttgataa aaagggagat ccagtgttgg 1621 agaggtaata aagacatatt agcaccaaaa aaaaaaaaaa aa //