LOCUS BC022561 2213 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DENN/MADD domain containing 1B, mRNA (cDNA clone
MGC:27044 IMAGE:4793412), complete cds.
ACCESSION BC022561
VERSION BC022561.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2213)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2213)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450670.
FEATURES Location/Qualifiers
source 1..2213
/db_xref="H-InvDB:HIT000039629"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27044 IMAGE:4793412"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2213
/gene="DENND1B"
/gene_synonym="MGC27044"
/gene_synonym="RP11-53I24.2"
/db_xref="GeneID:163486"
/db_xref="HGNC:HGNC:28404"
CDS 282..1472
/gene="DENND1B"
/gene_synonym="MGC27044"
/gene_synonym="RP11-53I24.2"
/codon_start=1
/product="DENN/MADD domain containing 1B"
/protein_id="AAH22561.1"
/db_xref="GeneID:163486"
/db_xref="HGNC:HGNC:28404"
/translation="MAAAPREEKRWPQPVFSNPVVLWKFPEDFGDQEILQSVPKFCFP
FDVERVSQNQVGQHFTFVLTDIESKQRFGFCRLTSGGTICLCILSYLPWFEVYYKLLN
TLADYLAKELENDLNETLRSLYNHPVPKANTPVNLSVHSYFIAPDVTGLPTIPESRNL
TEYFVAVDVNNMLQLYASMLHERRIVIISSKLSTLTACIHGSAALLYPMYWQHIYIPV
LPPHLLDYCCAPMPYLIGIHSSLIERVKNKSLEDVVMLNVDTNTLESPFSDLNNLPSD
VVSALKNKLKKQSTATGDGVARAFLRAQAALFGYYRDALRYKPGEPITFCEESFVKHR
SSVMKQFLETAINLQLFKQFIDGRLAKLNAGRGFSDVFEEEITSGGFCGGKDKLQYDY
PFSQ"
BASE COUNT 660 a 443 c 445 g 665 t
ORIGIN
1 ggtgggggcc ggacggacag ccccacaccg acatgtaacc atggactgca ggaccaaggc
61 aaatccagac agaacctttg acttggtgtt gaaagtgaaa tgtcatgcct ctgaaaatga
121 agaggacagt ccagcttatc tgccgaggat tccccctgga aaagtacgcc gattcgcatt
181 ttgcattaag aaactggaaa actttcctgt cggtcctggc gtagcgcctc ccgtgtccgg
241 ggtagacctt gtaccggctg aaaccgcata gctcgacctt catggcggca gctccacggg
301 aggagaaaag atggccccaa cctgtatttt cgaatcctgt ggtattgtgg aaattcccag
361 aggactttgg agaccaggaa atactacaga gtgtgccaaa gttctgtttt ccctttgacg
421 ttgaaagggt gtctcagaat caagttggac agcactttac ctttgtactg acagacattg
481 aaagtaaaca gagatttgga ttctgcagac tgacgtcagg aggcacaatt tgtttatgca
541 tccttagtta ccttccctgg tttgaagtgt attacaagct tctaaatact cttgcagatt
601 acttggctaa ggaactggaa aatgatttga atgaaactct cagatcactg tataaccacc
661 cagtaccaaa ggcaaatact cctgtaaatt tgagtgtgca ttcctacttc attgcccctg
721 atgtaactgg actcccaaca atacccgaga gtagaaatct tacagaatat tttgttgccg
781 tggatgtgaa caacatgctg cagctgtatg ccagtatgct gcatgaaagg cgcatcgtga
841 ttatctcgag caaattaagc actttaactg cctgtatcca tggatcagct gctcttctat
901 acccaatgta ttggcaacac atatacatcc cagtgcttcc tccacacctg ctggactact
961 gctgtgcccc aatgccatac ctgattggaa tacactccag cctcatagag agagtgaaaa
1021 acaaatcatt ggaagatgtt gttatgttaa atgttgatac aaacacatta gaatcaccat
1081 ttagtgactt gaacaaccta ccaagtgatg tggtctcggc cttgaaaaat aaactgaaga
1141 agcagtctac agctacgggt gatggagtag ctagggcctt tcttagagca caggctgctt
1201 tgtttggata ctacagagat gcactgagat acaaacctgg tgagcccatc actttctgtg
1261 aggagagttt tgtaaagcac cgctcaagcg tgatgaaaca gttcctggaa actgccatta
1321 acctccagct ttttaagcag tttatcgatg gtcgactggc aaaactaaat gcaggaaggg
1381 gtttctctga tgtatttgaa gaagagatca cttcaggtgg cttttgtgga ggtaaagaca
1441 agttacaata tgattatcca ttttctcaat aacaattttc ttggtctttg cacttgtgtc
1501 tgataaaacc tatttcataa acaactaatg atttcctcct aaatatgtaa tgtcttaaat
1561 acatttttca tcttataaaa gctatggaat tagcttattt tgcctgatac ctgttactca
1621 aggcattaag ttggcctcct gaattggcag ctgttggcct cgataatctc ttaatattgc
1681 tggaaattag taatacagaa atccagtcaa ctcatatctt cctgtctttc cttctgaata
1741 gtagtattct ctgctagaaa actactagtg atggttatta ctgagtatga atttaagaac
1801 tgaggttatg attggtaata caatccaaaa agaagggtct gaacaccaaa attctttata
1861 catatttaag taactgtatt attattatac agatgtcttt acctttttga ctttatagat
1921 cactgcagca ttaagaaagt ttccagttta ccattccata agtacaatta atccttctag
1981 tgtaaatgtt caaatactgt tataattatc taggcaatta ataatttaca aactgatatt
2041 tttgcacgat tgtagtggtg tatagtcttg acttgcagag cattttgctt gagtccttga
2101 aatgtcgtgt tcattcatta tttgctgagt gcttacaatg tattaggcac tgttctaaat
2161 attaagtgta ctaaataaac aaaaatcctt gtattctgaa aaaaaaaaaa aaa
//