LOCUS BC022557 1646 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens transmembrane protein 22, mRNA (cDNA clone MGC:26936
IMAGE:4793991), complete cds.
ACCESSION BC022557
VERSION BC022557.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1646)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1646)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376859.
FEATURES Location/Qualifiers
source 1..1646
/db_xref="H-InvDB:HIT000039628"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26936 IMAGE:4793991"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1646
/gene="TMEM22"
/gene_synonym="DKFZp564K2464"
/gene_synonym="MGC3295"
/db_xref="GeneID:80723"
CDS 150..1388
/gene="TMEM22"
/gene_synonym="DKFZp564K2464"
/gene_synonym="MGC3295"
/codon_start=1
/product="TMEM22 protein"
/protein_id="AAH22557.1"
/db_xref="GeneID:80723"
/translation="MDTSPSRKYPVKKRVKIHPNTVMVKYTSHYPQPGDDGYEEINEG
YGNFMEENPKKGLLSEMKKKGRAFFGTMDTLPPPTEDPMINEIGQFQSFAEKNIFQSR
KMWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYEEAPFG
PSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKM
AYVDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYR
SIKEKISMWTALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLG
VYYALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYK
LYWRNLRRQDYQEILDSPIK"
BASE COUNT 502 a 319 c 327 g 498 t
ORIGIN
1 aggcgcagag tccgcgcggc ggcgcccctc tccctccgca gtactccgga cggcgcccgc
61 ctcgattttc ccaggcgagg gcacgcccgc gtcagtcgcc tccggggcac cttcctcgcc
121 acgacacgca gaattaatta tctgaagaaa tggatacttc tccctccaga aaatatccag
181 ttaaaaaacg ggtgaaaata catcccaaca cagtgatggt gaaatatact tctcattatc
241 cccagcctgg cgatgatgga tatgaagaaa tcaatgaagg ctatgggaat tttatggagg
301 aaaatccaaa gaaaggtctg ctgagtgaaa tgaaaaaaaa agggagagct ttctttggaa
361 ccatggatac cctacctcca ccaacagaag acccaatgat caatgagatt ggacaattcc
421 agagctttgc agaaaaaaac atttttcaat cccgaaaaat gtggatagtg ctgtttggat
481 ctgctttggc tcatggatgt gtagctctta tcactaggct tgtttctgat cggtctaaag
541 ttccatctct agaactgatt tttatccgtt ctgtttttca ggtcttatct gtgttagttg
601 tgtgttacta tgaggaggcc ccctttggac ccagtggata cagattacga ctcttctttt
661 atggtgtatg caatgtcatt tctatcactt gtgcttatac atcattttca atagttcctc
721 ccagcaatgg gaccactatg tggagagcca caactacagt cttcagtgcc attttggctt
781 ttttactcgt agatgagaaa atggcttatg ttgacatggc tacagttgtt tgcagcatct
841 taggtgtttg tcttgtcatg atcccaaaca ttgttgatga agacaattct ttgttaaatg
901 cctggaaaga agcctttggg tacaccatga ctgtgatggc tggactgacc actgctctct
961 caatgatagt atacagatcc atcaaggaga agatcagcat gtggactgca ctgtttactt
1021 ttggttggac tgggacaatt tggggaatat ctactatgtt tattcttcaa gaacccatca
1081 tcccattaga tggagaaacc tggagttatc tcattgctat atgtgtctgt tctactgcag
1141 cattcttagg agtttattat gccttggaca aattccatcc agccttggtt agcacagtac
1201 aacatttgga gattgtggta gctatggtct tgcagcttct cgtgctgcac atatttccta
1261 gcatctatga tgtttttgga ggggtaatca ttatgattag tgtttttgtc cttgctggct
1321 ataaacttta ctggaggaat ttaagaaggc aggactacca ggaaatacta gactctccca
1381 ttaaatgaat acctgattat tattgtctca ttaatgttca gttattaata tgtatactgc
1441 cattttaatg tttacctatg aatgtctttt gtgttatata actgacagag tgctataaaa
1501 tatataatat atacaaatgc agaaaattta ttctagtcta atatattcaa atacaaatat
1561 taaatatatg aaatacgtta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaac caaaaaaaaa aaaaaa
//