LOCUS BC022547 2726 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 93, mRNA (cDNA clone
MGC:26818 IMAGE:4812314), complete cds.
ACCESSION BC022547
VERSION BC022547.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2726)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748798.
FEATURES Location/Qualifiers
source 1..2726
/db_xref="H-InvDB:HIT000039621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26818 IMAGE:4812314"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2726
/gene="C1orf93"
/gene_synonym="MGC26818"
/gene_synonym="RP3-395M20.10"
/db_xref="GeneID:127281"
/db_xref="HGNC:HGNC:28390"
CDS 77..673
/gene="C1orf93"
/gene_synonym="MGC26818"
/gene_synonym="RP3-395M20.10"
/codon_start=1
/product="chromosome 1 open reading frame 93"
/protein_id="AAH22547.1"
/db_xref="GeneID:127281"
/db_xref="HGNC:HGNC:28390"
/translation="MSTVDLARVGACILKHAVTGEAVELRSLWREHACVVAGLRRFGC
VVCRWIAQDLSSLAGLLDQHGVRLVGVGPEALGLQEFLDGDYFAGELYLDESKQLYKE
LGFKRYNSLSILPAALGKPVRDVAAKAKAVGIQGNLSGDLLQSGGLLVVSKGGDKVLL
HFVQKSPGDYVPKEHILQVLGISAEVCASDPPQCDREV"
BASE COUNT 511 a 816 c 846 g 553 t
ORIGIN
1 gggatccagg agcgaggagc cgggagcggg gaacagggag tcggggagcc gggaaccggg
61 gctggcagcg gccgccatga gcacggtgga ccttgctcgc gtgggcgcgt gcatcctgaa
121 gcatgcggtg accggggagg ccgtggagct gcggagcctg tggcgggagc acgcgtgcgt
181 ggtggccggg ctgcggcgct tcgggtgcgt ggtgtgccgc tggatcgccc aggacctcag
241 cagccttgct gggctcctgg accaacacgg cgtgcgcctg gtgggcgtag ggcccgaggc
301 cctgggtctg caggagttcc tggacggcga ctacttcgcg ggagagctct acctggatga
361 gagcaagcag ctttacaagg agctaggctt caagcggtac aacagcctga gcatcctccc
421 agcagctctg gggaagcccg tgcgtgatgt ggctgccaag gccaaggccg ttggcatcca
481 ggggaacttg tctggggacc tgctgcagag cggagggctg ctggtggtca gcaaaggtgg
541 tgataaagtg ctcctgcatt tcgtccagaa gtccccaggc gactacgtcc ccaaggagca
601 catcctgcag gtcctgggca tctctgcgga ggtctgtgcc agcgacccgc ctcagtgtga
661 cagagaggtg tgagggaggc gaaggccctg gcctccgagg atctgggtgg cgtctgctgc
721 cctaggtgtg ctggaagtcc acttggaaga actgttccgg aggcgctggg tcgggatgcc
781 gaacctctcc tgatccgccg gcagcaacga gccattaaaa ctgcagttcc tgaccacgca
841 ctgcttcgca ggctccgagc cctgcatcct ccacagcccc cgccttgctc actgttgggc
901 cctcagggcg ggcagggtgg ctgtgagtca caggtgtcat cttcctgctc tgcgactttc
961 tctggagacc ttgggccttt ggcctgtggg gcactgggga tggtaacctc actgccccgt
1021 cactcccttc aaaggcgaca gacccaagcc cacgtcagga gaggagcgtg gggtcagctc
1081 cagcagggtc ggggtcagtg cctgtgtctg gtgggggcca ctcaggagag ttgggttttc
1141 agggcagaga tgggcttgat tccacctggt ggggtgggtg gaccctggag actctcaggt
1201 gatgggccag cctgccccaa ggctctttac tgatgtcaga atcattgttt gcacctgctg
1261 ggtatggcct ttggggcggc cggcccggga gggtcttagt ctaattaggt gtgtccagct
1321 tcttggccac ctttccctgg ggaccctaac aggcccagag cagagcccct tacctcccag
1381 gtcagactac ctgctcaggc cctcccctcc catgcaggcc gatgacaact gcagccctct
1441 ctgcactccc tagtccagac ctggggacca ctgtgggttc ctgtgggtct cccggctccc
1501 ttcctgcccc caatgccacc attgcagtgg ccatttaaaa atgcatagca ggtgacccac
1561 tgcgtccctt tgcgttcagc ccctcctctg gctttcagtt acaccaagct aaaatttcag
1621 gttcccagct gcagctctct gggtcccccg gtgccccagt ggggctctcc gcatctgaat
1681 gtgtggtccc tgggggtggg cacttggggg catcctggtc actgctggcc ctagcattgg
1741 accctaggag acctgactgg aactggctcc ctccccatca gctcccagct gtcactctct
1801 cccacccccg ggcagctgtt ttgcccaaga ccactgctac ctgtttaccc accctggtcc
1861 ctcccagaca agcaaggcct ctgatttctt tgaagcattt acttagctca agtctgaagc
1921 tgtagatact ggaagacaat gcaccttgga gggtgggcag gacacagttg attgtctcta
1981 cagagctgtg acgggggcac tgagccccgc tggtgtctgt ggagggggct ccggtccagg
2041 tactgcactg gacactgctc atccctgggt gtcaggcagg tggctgcacc ctaggccagg
2101 cgcagaggcc tggcaggcag gcttggcatg gttggccggg gcgggacgta cactgggtcg
2161 ccgctagctg caccttcgca cagatgcctc cgagcagcgg gtgggcgtgg gccgcacagc
2221 gcggcagggc cttggctacc acacgcggca tcgctccttg gggtgcatgg gggtgccccg
2281 ggcacagtgg aacgtgtctg cgaaggcggc caggttctgc agcgacccca gtaccctgtg
2341 ggtgggtggg tgtgacagca ggagcattgc catcttggac aaacatggcc attttaagtt
2401 ctccgtgatt aaaaaccagc ccaaaacatc agcctaatgg ctcatgtcag tatgagcaga
2461 aacatttcaa ccatgagata aacccccatc tgaccagaaa catgccaatc ctgagaataa
2521 cctcccctcc agccagagat attccaactc tgcaataaaa ctctccttca cacagaaaca
2581 ttcgcagcct gcggtaggct ccccattcct aaacccttaa atgcccttag tctgtaagag
2641 aatgtccctg accgaaatcg gccagaagcc cctctcaggt ttattcccaa aataaacctg
2701 tctctgttgg aaaaaaaaaa aaaaaa
//