LOCUS BC022536 3093 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens Vps20-associated 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:26689 IMAGE:4817057), complete cds. ACCESSION BC022536 VERSION BC022536.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3093) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3093) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: n Column: 15. FEATURES Location/Qualifiers source 1..3093 /db_xref="H-InvDB:HIT000039612" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26689 IMAGE:4817057" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3093 /gene="VTA1" /gene_synonym="DRG-1" /gene_synonym="DRG1" /gene_synonym="HSPC228" /gene_synonym="LIP5" /gene_synonym="My012" /gene_synonym="SBP1" /db_xref="GeneID:51534" /db_xref="HGNC:HGNC:20954" /db_xref="MIM:610902" CDS 26..949 /gene="VTA1" /gene_synonym="DRG-1" /gene_synonym="DRG1" /gene_synonym="HSPC228" /gene_synonym="LIP5" /gene_synonym="My012" /gene_synonym="SBP1" /codon_start=1 /product="Vps20-associated 1 homolog (S. cerevisiae)" /protein_id="AAH22536.1" /db_xref="GeneID:51534" /db_xref="HGNC:HGNC:20954" /db_xref="MIM:610902" /translation="MAALAPLPPLPAQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQ TGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYAD NEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGE TPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGA HAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDVRLTPEDFARAQKYC KYAGSALQYEDVSTAVQNLQKALKLLTTGRE" BASE COUNT 1008 a 549 c 585 g 951 t ORIGIN 1 aggaagtggt gagttcggag tagagatggc cgcgcttgca ccgctgcccc cgctccccgc 61 acagttcaag agcatacagc atcatctgag gacggctcag gagcatgaca agcgagaccc 121 tgtggtggct tattactgtc gtttatacgc aatgcagact ggaatgaaga tcgatagtaa 181 aactcctgaa tgtcgcaaat ttttatcaaa gttaatggat cagttagaag ctctaaagaa 241 gcagttgggt gataatgaag ctattactca agaaatagtg ggctgtgccc atttggagaa 301 ttatgctttg aaaatgtttt tgtatgcaga caatgaagat cgtgctggac gatttcacaa 361 aaacatgatc aagtccttct atactgcaag tcttttgata gatgtcataa cagtatttgg 421 agaactcact gatgaaaatg tgaaacacag gaagtatgcc agatggaagg caacatacat 481 ccataattgt ttaaagaatg gggagactcc tcaagcaggc cctgttggaa ttgaagaaga 541 taatgatatt gaagaaaatg aagatgctgg agcagcctct ctgcccactc agccaactca 601 gccatcatca tcttcaactt atgacccaag caacatgcca tcaggcaact atactggaat 661 acagattcct ccgggtgcac acgctccagc taatacacca gcagaagtgc ctcacagcac 721 aggtgtagca agtaatacta tccaacctac tccacagact atacctgcca ttgatcccgc 781 acttttcaat acaatttccc agggggatgt tcgtctaacc ccagaagact ttgctagagc 841 tcagaagtac tgcaaatatg ctggcagtgc tttgcagtat gaagatgtaa gcactgctgt 901 ccagaatcta caaaaggctc tcaagttact gacgacaggc agagaatgaa gcctttgtat 961 gacagaccca tgtatttttg gcatgaggaa ctaacagtcc attactctat cttcagccta 1021 tcaggatcac agttttaagg aagacttggt tttgttgaat atgacaatga aatctgtgtg 1081 tatcagattt ttattgaagc attcatcagc agcctcaacc agttttcatt gtccatttac 1141 tagattcaat cgtctctgag tatatagggc tgatgttagc aagaccctaa aaatgtccat 1201 tgaaccctgc ttcaaaaaat gaaaacacac ctctataaaa tgtgtactgg gaataagctt 1261 tgtatttaca tacattaggg gaatttttta aaatctgtaa tgtttggaca aacagatgat 1321 attactttgc tataaaatta taaatgtaac ttttaataaa gatagccaga atattctaaa 1381 ttagaaatta cgtttttgtt tccctcaaga cataaaacaa atataaacat tctaaactgc 1441 tggatgaatc tgaaaagaca ttaagttcaa attttaattt attctcatat taaatataac 1501 tccattaaaa gtttaaaatt tcatgggaga aaatataata aggtaaagag gtagaatcac 1561 tttcagactt aagaataatg ttgatttccc aagtgcttta ccttatctgt taaagcgtaa 1621 gatgaattgg tatttgcttc ataggcagtt tgactgcatg tattagagaa tgaaaagaag 1681 atatttgtag taatgcctgg aaacttggtg ctttaaatta aggtactcct ctgctgctgt 1741 agaatggatt ccacacagtg gatagctatg ggtgattcag aatattatgt ttagattccc 1801 atttgttaag tttataagtt ttgtggggaa ttatgaactt actgtgtact acctgcattt 1861 gtgctgtgtg aaaaataaat acaaggattc gtttagctaa ttcaacttac tacaaagaca 1921 aatgtctgtt tttatttgcc tgctaggatt gtctttttta aaagtcattt ttatttatag 1981 gaatatgggt gtttctatag gaagaaacag gttttttgtt ttttgttttt taagataaat 2041 ttgacaaagt taactgaaat ttatctggtc cattttattc atgctactaa gatgggaatc 2101 tttaaacaca agggtcagca agctttggcc catggattgg ccacctgtta cgtaaataaa 2161 gtttctttga aacaagccta cactcattca tttatgtttt gtctgtggtt gctttccaca 2221 actgcagagt tgtatggctt gcaagtctaa aaacatttac tatttggccc tctaagaaaa 2281 agttaagaca cctagtctaa tggccttttg ggaaaaaaca aatcactaac tcataatcat 2341 ttatatccat tattttctgc ataaatgtaa tgctattgta cagggtttgg tagaataaat 2401 attcagactg actaaactgt tctaaatcct cacaaaaaag tccccaaaca acatgcctcc 2461 taaaaaacat tttcctatct tttacaagag gtatgaacat ttgtagggtt ccacatttgc 2521 atctagaaat ccaatgctct ttagaatgtt attacgaata gaaagatggc caggatgacc 2581 tttagtgtta catgatgttc agcaaatttt aattcaaacc ttgatatgcc tggacactga 2641 aaagtaaacg catcacctcc tattttatac actaccttct ggttcccaat tgggagagca 2701 catagaggga aggagacaat atagaaacta cggagtccgc tggtagtggg ctgcatggtg 2761 tgacagagcc cttctctgta aaatggaaat gacaccacta gccatctcaa tagttacaag 2821 aattaaaaga gatacagtac ctgaagtgct tagcgcatgg tagcatttca taaatgttta 2881 gtgtcaatac taatgctcta ataatgtaaa ttgttaataa tttatttccc taatatcagg 2941 aaatcccagt tgtctatgtg gcccagtgct taaaaacgcc ttcttgcatg aggggattga 3001 actatacaat gtttgttaac tttgtatttg tattttttcc tataaaatct taaaataaaa 3061 ttaggagatg tgttccgaaa aaaaaaaaaa aaa //