LOCUS BC022531 3231 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens olfactomedin 3, mRNA (cDNA clone MGC:26675
IMAGE:4812035), complete cds.
ACCESSION BC022531
VERSION BC022531.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3231)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3231)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54312047.
FEATURES Location/Qualifiers
source 1..3231
/db_xref="H-InvDB:HIT000039609"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26675 IMAGE:4812035"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3231
/gene="OLFM3"
/gene_synonym="NOE3"
/gene_synonym="NOELIN3"
/gene_synonym="NOELIN3_V1"
/gene_synonym="NOELIN3_V2"
/gene_synonym="NOELIN3_V3"
/gene_synonym="NOELIN3_V4"
/gene_synonym="NOELIN3_V5"
/gene_synonym="NOELIN3_V6"
/gene_synonym="OPTIMEDIN"
/db_xref="GeneID:118427"
/db_xref="HGNC:HGNC:17990"
/db_xref="MIM:607567"
CDS 177..1553
/gene="OLFM3"
/gene_synonym="NOE3"
/gene_synonym="NOELIN3"
/gene_synonym="NOELIN3_V1"
/gene_synonym="NOELIN3_V2"
/gene_synonym="NOELIN3_V3"
/gene_synonym="NOELIN3_V4"
/gene_synonym="NOELIN3_V5"
/gene_synonym="NOELIN3_V6"
/gene_synonym="OPTIMEDIN"
/codon_start=1
/product="olfactomedin 3"
/protein_id="AAH22531.1"
/db_xref="GeneID:118427"
/db_xref="HGNC:HGNC:17990"
/db_xref="MIM:607567"
/translation="MQATSNLLNLLLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGR
CICTVVAPEQNLCSRDAKSRQLRKLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMK
GLKAKFRQIEDDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNL
SAVLTGIQEEIGAYDYEELHQRVLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRF
GAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHV
VYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEI
GLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTLYVTNSHLT
GAKVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARDRALCAWNNGHQVLFNVTLFH
IIKTEDDT"
BASE COUNT 1059 a 614 c 600 g 958 t
ORIGIN
1 agggcggctg ccgccgctgc cgctgctgct gttattgcta ctgctgctgc cgccgcctct
61 gcttccactc ggctctgact ggcaggcaga aagtgcaact gacgagggaa aggtctctgc
121 agtgagtgga gagcctacat aaaagagagt aaagaggggc aaaaacccag atcagaatgc
181 aggcgacgtc caaccttctc aacctcctgc tgctgtcttt gtttgccgga ttagatcctt
241 ccaagactca gattagtcct aaagaagggt ggcaggtgta cagctcagct caggatcctg
301 atgggcggtg catttgtaca gttgttgctc cagaacaaaa cctgtgttcc cgggatgcca
361 aaagcaggca acttcgcaaa ctactggaaa aggttcagaa catgtcccag tctattgaag
421 tcttaaactt gagaactcag agagatttcc aatatgtttt aaaaatggaa acccaaatga
481 aagggctgaa ggcaaaattt cggcagattg aagatgatcg aaagacactt atgaccaagc
541 attttcagga gttgaaagag aaaatggacg agctcctgcc tttgatcccc gtgctggaac
601 agtacaaaac agatgctaag ttaatcaccc agttcaagga ggaaataagg aatctgtctg
661 ctgtcctcac tggtattcag gaggaaattg gtgcctatga ctacgaggaa ctacaccaaa
721 gagtgctgag cttggaaaca agacttcgtg actgcatgaa aaagctaaca tgtggcaaac
781 tgatgaaaat cacaggccca gttacagtca agacatctgg aacccgattt ggtgcttgga
841 tgacagaccc tttagcatct gagaaaaaca acagagtctg gtacatggac agttatacta
901 acaataaaat tgttcgtgaa tacaaatcaa ttgcagactt tgtcagtggg gctgaatcaa
961 ggacatacaa ccttcctttc aagtgggcag gaactaacca tgttgtctac aatggctcac
1021 tctattttaa caagtatcag agtaatatca tcatcaaata cagctttgat atggggagag
1081 tgcttgccca acgaagcctg gagtatgctg gttttcataa tgtttacccc tacacatggg
1141 gtggattctc tgacatcgac ctaatggctg atgaaatcgg gctgtgggct gtgtatgcaa
1201 ctaaccagaa tgcaggcaat attgtcatca gccaacttaa ccaagatacc ttggaggtga
1261 tgaagagctg gagcactggc taccccaaga gaagtgcagg ggaatctttc atgatctgtg
1321 ggacactgta tgtcaccaac tcccacttaa ctggagccaa ggtgtattat tcctattcca
1381 ccaaaacctc cacatatgag tacacagaca ttcccttcca taaccaatac tttcacatat
1441 ccatgcttga ctacaatgca agagatcgag ctctctgtgc ctggaacaat ggccaccagg
1501 tgctgttcaa tgtcaccctt ttccatatca tcaagacaga ggatgacaca taggcaaatg
1561 tgacatgttt tcattgattt aaacagtgtg atttgtgata aactctataa gaccccttcc
1621 gtttttttct tcactattat ttttcatcat ttctccaaag caaagcattt ttattgtaaa
1681 gttggtgttt caaaaacata gctgagcttg tctaacttac catgttggaa acacatctta
1741 acttctaaat ttacaaggcc tatcatgtcc ttgtcatgaa aagcactaaa aaaaaaaaag
1801 agtttaagtg gctaaagtca tagttttgca agagattaat gatctgcctt atattagagt
1861 cagagactaa tggtggctta aatgcacgaa tgtctttttt tttaaaactg tcatttttta
1921 ctgtcttttg ctccatatca ggaaatattt tggtaggaat taggagaaca aaaagcactt
1981 ttatcccatt tatttcttta aaaaatgtaa ggatttcatt tatattgaaa aataatatta
2041 atcattttgc tgttaacaca attctctgat gcggtgctgt acagtcattt ttaaatctct
2101 tgctaacatt ttattggcag tatgtatttc taccattgta accaccattg tgctattgta
2161 tctcttcact tctgtgaaag taatattttt tataaaatac actgaaattt aacctcagta
2221 attgagtcca ttttcaagtg tggtcaagaa taatcttctt ggcttacccc tttacataag
2281 cattataaac taaaatgaaa accaaaccag acacctgaca tagagtcttt attttacccc
2341 aagttttttg ggccactgac attgaatgca acaactgatt tcatacaact gagttactct
2401 gttcactcca ctgaatgcaa cccatatagt ttcttgcaca aggtgcatct ggattccaaa
2461 tattggattt gagttgactc tactcattta ttatacacta aagaaatttt gttcttcata
2521 gttaaatgta ctagcattta atttatattt tacatacaac ttgcaataat gaaattcctt
2581 atgtcaggac cctgaaaata agcacatttg aaaactctta gaaaaaaaaa attctgtaat
2641 gtcctctaga tttagattat gagccctgag gagttattgg caagatttgt gcaaaataaa
2701 atatggggag acttgggagt tgtctttgtg gtttcaaaag tgtaaataac caattcagaa
2761 aacaaaatgg aaaaacgacc ccttgttacc ttgattcact gtatgtggaa aaataatgta
2821 accaaaaggg aagagcttta ataatactta tgttaataac tctatgaaac atataagcta
2881 actatatatc aaacatttca ttgagtttgg atgtattttc aacatattaa aaaaatagtt
2941 ccctaaggca gctttatgga aactaatata ggttggtttt acaatttaaa aagtatattc
3001 tataataaat aataaaacaa attgttttaa atgtttagtt tcacacatac atagtaccat
3061 gattttcttt gaaagataag gatgtaatga tttagataaa gcatcatgta aagaaatcct
3121 aacatttaag tgtaattcat ttcaaatgtc acaagtaaag catcatcctc aaatatctca
3181 ctgtcaaaat tgtagaatta aataacccaa tctcgaaaaa aaaaaaaaaa a
//