LOCUS BC022512 3189 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens platelet/endothelial cell adhesion molecule, mRNA
(cDNA clone MGC:26550 IMAGE:4816878), complete cds.
ACCESSION BC022512
VERSION BC022512.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3189)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3189)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314616.
FEATURES Location/Qualifiers
source 1..3189
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26550 IMAGE:4816878"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3189
/gene="PECAM1"
/gene_synonym="CD31"
/gene_synonym="PECAM-1"
/db_xref="GeneID:5175"
/db_xref="HGNC:HGNC:8823"
/db_xref="MIM:173445"
CDS 194..2410
/gene="PECAM1"
/gene_synonym="CD31"
/gene_synonym="PECAM-1"
/codon_start=1
/product="platelet/endothelial cell adhesion molecule"
/protein_id="AAH22512.1"
/db_xref="GeneID:5175"
/db_xref="HGNC:HGNC:8823"
/db_xref="MIM:173445"
/translation="MQPRWAQGATMWLGVLLTLLLCSSLEGQENSFTINSVDMKSLPD
WTVQNGKNLTLQCFADVSTTSHVKPQHQMLFYKDDVLFYNISSMKSTESYFIPEVRIY
DSGTYKCTVIVNNKEKTTAEYQVLVEGVPSPRVTLDKKEAIQGGIVRVNCSVPEEKAP
IHFTIEKLELNEKMVKLKREKNSRDQNFVILEFPVEEQDRVLSFRCQARIISGIHMQT
SESTKSELVTVTESFSTPKFHISPTGMIMEGAQLHIKCTIQVTHLAQEFPEIIIQKDK
AIVAHNRHGNKAVYSVMAMVEHSGNYTCKVESSRISKVSSIVVNITELFSKPELESSF
THLDQGERLNLSCSIPGAPPANFTIQKEDTIVSQTQDFTKIASKSDSGTYICTAGIDK
VVKKSNTVQIVVCEMLSQPRISYDAQFEVIKGQTIEVRCESISGTLPISYQLLKTSKV
LENSTKNSNDPAVFKDNPTEDVEYQCVADNCHSHAKMLSEVLRVKVIAPVDEVQISIL
SSKVVESGEDIVLQCAVNEGSGPITYKFYREKEGKPFYQMTSNATQAFWTKQKANKEQ
EGEYYCTAFNRANHASSVPRSKILTVRVILAPWKKGLIAVVIIGVIIALLIIAAKCYF
LRKAKAKQMPVEMSRPAVPLLNSNNEKMSDPNMEANSHYGHNDDVGNHAMKPINDNKE
PLNSDVQYTEVQVSSAESHKDLGKKDTETVYSEVRKAVPDAVESRYSRTEGSLDGT"
BASE COUNT 945 a 767 c 738 g 739 t
ORIGIN
1 tttccagcca tggctgccat tacctgacca gcgccacagc cggtctctct gcaggcgccg
61 ggagaagtga ccagagcaat ttctgctttt cacagggcgg gtttctcaac ggtgacttgt
121 gggcagtgcc ttctgctgag cgagtcatgg cccgaaggca gaactaactg tgcctgcagt
181 cttcactctc aggatgcagc cgaggtgggc ccaaggggcc acgatgtggc ttggagtcct
241 gctgaccctt ctgctctgtt caagccttga gggtcaagaa aactctttca caatcaacag
301 tgttgacatg aagagcctgc cggactggac ggtgcaaaat gggaagaacc tgaccctgca
361 gtgcttcgcg gatgtcagca ccacctctca cgtcaagcct cagcaccaga tgctgttcta
421 taaggatgac gtgctgtttt acaacatctc ctccatgaag agcacagaga gttattttat
481 tcctgaagtc cggatctatg actcagggac atataaatgt actgtgattg tgaacaacaa
541 agagaaaacc actgcagagt accaggtgtt ggtggaagga gtgcccagtc ccagggtgac
601 actggacaag aaagaggcca tccaaggtgg gatcgtgagg gtcaactgtt ctgtcccaga
661 ggaaaaggcc ccaatacact tcacaattga aaaacttgaa ctaaatgaaa aaatggtcaa
721 gctgaaaaga gagaagaatt ctcgagacca gaattttgtg atactggaat tccccgttga
781 ggaacaggac cgcgttttat ccttccgatg tcaagctagg atcatttctg ggatccatat
841 gcagacctca gaatctacca agagtgaact ggtcaccgtg acggaatcct tctctacacc
901 caagttccac atcagcccca ccggaatgat catggaagga gctcagctcc acattaagtg
961 caccattcaa gtgactcacc tggcccagga gtttccagaa atcataattc agaaggacaa
1021 ggcgattgtg gcccacaaca gacatggcaa caaggctgtg tactcagtca tggccatggt
1081 ggagcacagt ggcaactaca cgtgcaaagt ggagtccagc cgcatatcca aggtcagcag
1141 catcgtggtc aacataacag aactattttc caagcccgaa ctggaatctt ccttcacaca
1201 tctggaccaa ggtgaaagac tgaacctgtc ctgctccatc ccaggagcac ctccagccaa
1261 cttcaccatc cagaaggaag atacgattgt gtcacagact caagatttca ccaagatagc
1321 ctcaaagtcg gacagtggga cgtatatctg cactgcaggt attgacaaag tggtcaagaa
1381 aagcaacaca gtccagatag tcgtatgtga aatgctctcc cagcccagga tttcttatga
1441 tgcccagttt gaggtcataa aaggacagac catcgaagtc cgttgcgaat cgatcagtgg
1501 aactttgcct atttcttacc aacttttaaa aacaagtaaa gttttggaga atagtaccaa
1561 gaactcaaat gatcctgcgg tattcaaaga caaccccact gaagacgtcg aataccagtg
1621 tgttgcagat aattgccatt cccacgccaa aatgttaagt gaggttctga gggtgaaggt
1681 gatagccccg gtggatgagg tccagatttc tatcctgtca agtaaggtgg tggagtctgg
1741 agaggacatt gtgctgcaat gtgctgtgaa tgaaggatct ggtcccatca cctataagtt
1801 ttacagagaa aaagagggca aacccttcta tcaaatgacc tcaaatgcca cccaggcatt
1861 ttggaccaag cagaaggcta acaaggaaca ggagggagag tattactgca cagccttcaa
1921 cagagccaac cacgcctcca gtgtccccag aagcaaaata ctgacagtca gagtcattct
1981 tgccccatgg aagaaaggac ttattgcagt ggttatcatc ggagtgatca ttgctctctt
2041 gatcattgcg gccaaatgtt attttctgag gaaagccaag gccaagcaga tgccagtgga
2101 aatgtccagg ccagcagtac cacttctgaa ctccaacaac gagaaaatgt cagatcccaa
2161 tatggaagct aacagtcatt acggtcacaa tgacgatgtc ggaaaccatg caatgaaacc
2221 aataaatgat aataaagagc ctctgaactc agacgtgcag tacacggaag ttcaagtgtc
2281 ctcagctgag tctcacaaag atctaggaaa gaaggacaca gagacagtgt acagtgaagt
2341 ccggaaagct gtccctgatg ccgtggaaag cagatactct agaacggaag gctcccttga
2401 tggaacttag acagcaaggc cagatgcaca tccctggaag gacatccatg ttccgagaag
2461 aacagatgat ccctgtattt caagacctct gtgcacttat ttatgaacct gccctgctcc
2521 cacagaacac agcaattcct caggctaagc tgccggttct taaatccatc ctgctaagtt
2581 aatgttgggt agaaagagat acagaggggc tgttgaattt cccacataca ctccttccac
2641 caagttggaa catccttgga aattggaaga gcacaagagg agatccaggg caaggccatt
2701 gggatattct gaaacttgaa tattttgttt tgtgcagaga taaagacctt ttccatgcac
2761 cctcatacac agaaaccaat tttctttttt atactcaatc atttctagcg catggcctgg
2821 ttagaggctg gttttttctc ttttcctttg gtccttcaaa ggcttgtagt tttgggtagt
2881 ccttgttctt tggaaataca cagtgctgac cagacagcct ccccctgtcc cctctatgac
2941 ctcgccctcc acaaatggga aaaccagact acttgggagc accgcctgtg aaataccaac
3001 ctgaagacac ggttcattca ggcaacgcac aaaacagaaa atgaaggtgg aacaagcaca
3061 gatgttcttc aactgttttt gtctacactc tttctctttt cctctaccat gctgaaggct
3121 gaaagacagg aagatggtgc catcagcaaa tattattctt aattgaaaac ttgaaaaaaa
3181 aaaaaaaaa
//