LOCUS BC022509 2494 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens secretogranin II (chromogranin C), mRNA (cDNA clone MGC:26541 IMAGE:4820104), complete cds. ACCESSION BC022509 VERSION BC022509.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2494) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2494) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: p Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68160946. FEATURES Location/Qualifiers source 1..2494 /db_xref="H-InvDB:HIT000039589" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26541 IMAGE:4820104" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2494 /gene="SCG2" /gene_synonym="CHGC" /gene_synonym="SgII" /gene_synonym="SN" /db_xref="GeneID:7857" /db_xref="HGNC:HGNC:10575" /db_xref="MIM:118930" CDS 138..1991 /gene="SCG2" /gene_synonym="CHGC" /gene_synonym="SgII" /gene_synonym="SN" /codon_start=1 /product="secretogranin II (chromogranin C)" /protein_id="AAH22509.1" /db_xref="GeneID:7857" /db_xref="HGNC:HGNC:10575" /db_xref="MIM:118930" /translation="MAEAKTHWLGAALSLIPLIFLISGAEAASFQRNQLLQKEPDLRL ENVQKFPSPEMIRALEYIENLRQQAHKEESSPDYNPYQGVSVPLQQKENGDESHLPER DSLSEEDWMRIILEALRQAENEPQSAPKENKPYALNSEKNFPMDMSDDYETQQWPERK LKHMQFPPMYEENSRDNPFKRTNEIVEEQYTPQSLATLESVFQELGKLTGPNNQKRER MDEEQKLYTDDEDDIYKANNIAYEDVVGGEDWNPVEEKIESQTQEEVRDSKENIEKNE QINDEMKRSGQLGIQEEGLRKESKDQLSDDVSKVIAYLKRLVNAAGSGRLQNGQNGER ATRLFEKPLDSQSIYQLIEISRNLQIPPEDLIEMLKTGEKPNGSVEPERELDLPVDLD DISEADLDHPDLFQNRMLSKSGYPKTPGGAGTEALPDGLSVEDILNLLGMESAANQKT SYFPNPYNQEKVLPRLPYGAGRSRSNQLPKAAWIPHVENRQMAYENLNDKDQELGEYL ARMLVKYPEIINSNQVKRVPGQGSSEGDLQEEEQIEQAIKEHLNQGSSQETDKLAPVS KRFPVGPPKNDDTPNRQYWDEDLLMKVLEYLNQEKAEKGREHIAKRAMENM" BASE COUNT 824 a 484 c 582 g 604 t ORIGIN 1 ggcgggcgca gcggctccct ataagcagag gagctgtccg tgtgctgaaa cggcccgaga 61 agctcgcccg gagaacgggg aggaatatgc tgtggagctc ctctgccata taaacaaaaa 121 gaggaaatct ttcaaacatg gctgaagcaa agacccactg gcttggagca gccctgtctc 181 ttatcccttt aattttcctc atctctgggg ctgaagcagc ttcatttcag agaaaccagc 241 tgcttcagaa agaaccagac ctcaggttgg aaaatgtcca aaagtttccc agtcctgaaa 301 tgatcagggc tttggagtac atagaaaacc tccgacaaca agctcataag gaagaaagca 361 gcccagatta taatccctac caaggtgtct ctgtccccct tcagcaaaaa gaaaatggcg 421 atgaaagcca cttgcccgag agggattcac tgagtgaaga agactggatg agaataatac 481 tcgaagcttt gagacaggct gaaaatgagc ctcagtctgc accaaaagaa aataagccct 541 atgccttgaa ttcagaaaag aactttccaa tggacatgag tgatgattat gagacacagc 601 agtggccaga aagaaagctt aagcacatgc aattccctcc tatgtatgaa gagaattcca 661 gggataaccc ctttaaacgc acaaatgaaa tagtggagga acaatatact cctcaaagcc 721 ttgctacatt ggaatctgtc ttccaagagc tggggaaact gacaggacca aacaaccaga 781 aacgtgagag gatggatgag gagcaaaaac tttatacgga tgatgaagat gatatctaca 841 aggctaataa cattgcctat gaagatgtgg tcgggggaga agactggaac ccagtagagg 901 agaaaataga gagtcaaacc caggaagagg tgagagacag caaagagaat atagaaaaaa 961 atgaacaaat caatgatgag atgaaacgct cagggcagct tggcatccag gaagaaggtc 1021 ttcggaaaga gagtaaagac caactctcag atgatgtctc caaagtaatt gcctatttga 1081 aaaggttagt aaatgctgca ggaagtggga ggttacagaa tgggcaaaat ggggaaaggg 1141 ccaccaggct ttttgagaaa cctcttgatt ctcagtctat ttatcagctg attgaaatct 1201 caaggaattt acagataccc ccagaagact taattgagat gctcaaaact ggggagaagc 1261 cgaatggatc agtggaaccg gagcgggagc ttgaccttcc tgttgaccta gatgacatct 1321 cagaggctga cttagaccat ccagacctgt tccaaaatag gatgctctcc aagagtggct 1381 accctaaaac acctggtggt gctgggactg aggccctacc agacgggctc agtgttgagg 1441 atattttaaa tcttttaggg atggagagtg cagcaaatca gaaaacgtcg tattttccca 1501 atccatataa ccaggagaaa gttctgccaa ggctccctta tggtgctgga agatctagat 1561 cgaaccagct tcccaaagct gcctggattc cacatgttga aaacagacag atggcatatg 1621 aaaacctgaa cgacaaggat caagaattag gtgagtactt ggccaggatg ctagttaaat 1681 accctgagat cattaattca aaccaagtga agcgagttcc tggtcaaggc tcatctgaag 1741 gtgacctgca ggaagaggaa caaattgagc aggccatcaa agagcatttg aatcaaggca 1801 gctctcagga gactgacaag ctggccccgg tgagcaaaag gttccctgtg gggcccccga 1861 agaatgatga taccccaaat aggcagtact gggatgaaga tctgttaatg aaagtgctgg 1921 aatacctcaa ccaagaaaag gcagaaaagg gaagggagca tattgctaag agagcaatgg 1981 aaaatatgta agctgctttc attaattacc ctactttcat tcctcccacc ccaagcaaat 2041 cccaacattt ctcttcagtg tgttgacttc tatcctgtta acactgtaat atctttaaat 2101 gatgtacagg cagatgaaac caggtcactg gggagtctgc ttcatttcct ctgagctgtt 2161 atcttgtgta tggatatgtg taaatgttat gactccttga taaaaaattt attatgtcca 2221 ttattcaaga aagatatcta tgactgtgtt taatagtata tctaatggct gtggcattgt 2281 tgatgctcac atatgataaa aaagtgtcct ataattctat tgaaagtttt taatatttat 2341 tgaattattt tgttactgtc tgtagtgttt tgtggagtac tggaccaaaa aaataaagca 2401 ttataaatat atagttttat ttataaggcc ttttctattg tgtgttttac tgttgattaa 2461 taaatgttat ttctggacaa aaaaaaaaaa aaaa //