LOCUS       BC022509                2494 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens secretogranin II (chromogranin C), mRNA (cDNA clone
            MGC:26541 IMAGE:4820104), complete cds.
ACCESSION   BC022509
VERSION     BC022509.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2494)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 32 Row: p Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 68160946.
FEATURES             Location/Qualifiers
     source          1..2494
                     /db_xref="H-InvDB:HIT000039589"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:26541 IMAGE:4820104"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2494
                     /gene="SCG2"
                     /gene_synonym="CHGC"
                     /gene_synonym="SgII"
                     /gene_synonym="SN"
                     /db_xref="GeneID:7857"
                     /db_xref="HGNC:HGNC:10575"
                     /db_xref="MIM:118930"
     CDS             138..1991
                     /gene="SCG2"
                     /gene_synonym="CHGC"
                     /gene_synonym="SgII"
                     /gene_synonym="SN"
                     /codon_start=1
                     /product="secretogranin II (chromogranin C)"
                     /protein_id="AAH22509.1"
                     /db_xref="GeneID:7857"
                     /db_xref="HGNC:HGNC:10575"
                     /db_xref="MIM:118930"
                     /translation="MAEAKTHWLGAALSLIPLIFLISGAEAASFQRNQLLQKEPDLRL
                     ENVQKFPSPEMIRALEYIENLRQQAHKEESSPDYNPYQGVSVPLQQKENGDESHLPER
                     DSLSEEDWMRIILEALRQAENEPQSAPKENKPYALNSEKNFPMDMSDDYETQQWPERK
                     LKHMQFPPMYEENSRDNPFKRTNEIVEEQYTPQSLATLESVFQELGKLTGPNNQKRER
                     MDEEQKLYTDDEDDIYKANNIAYEDVVGGEDWNPVEEKIESQTQEEVRDSKENIEKNE
                     QINDEMKRSGQLGIQEEGLRKESKDQLSDDVSKVIAYLKRLVNAAGSGRLQNGQNGER
                     ATRLFEKPLDSQSIYQLIEISRNLQIPPEDLIEMLKTGEKPNGSVEPERELDLPVDLD
                     DISEADLDHPDLFQNRMLSKSGYPKTPGGAGTEALPDGLSVEDILNLLGMESAANQKT
                     SYFPNPYNQEKVLPRLPYGAGRSRSNQLPKAAWIPHVENRQMAYENLNDKDQELGEYL
                     ARMLVKYPEIINSNQVKRVPGQGSSEGDLQEEEQIEQAIKEHLNQGSSQETDKLAPVS
                     KRFPVGPPKNDDTPNRQYWDEDLLMKVLEYLNQEKAEKGREHIAKRAMENM"
BASE COUNT          824 a          484 c          582 g          604 t
ORIGIN      
        1 ggcgggcgca gcggctccct ataagcagag gagctgtccg tgtgctgaaa cggcccgaga
       61 agctcgcccg gagaacgggg aggaatatgc tgtggagctc ctctgccata taaacaaaaa
      121 gaggaaatct ttcaaacatg gctgaagcaa agacccactg gcttggagca gccctgtctc
      181 ttatcccttt aattttcctc atctctgggg ctgaagcagc ttcatttcag agaaaccagc
      241 tgcttcagaa agaaccagac ctcaggttgg aaaatgtcca aaagtttccc agtcctgaaa
      301 tgatcagggc tttggagtac atagaaaacc tccgacaaca agctcataag gaagaaagca
      361 gcccagatta taatccctac caaggtgtct ctgtccccct tcagcaaaaa gaaaatggcg
      421 atgaaagcca cttgcccgag agggattcac tgagtgaaga agactggatg agaataatac
      481 tcgaagcttt gagacaggct gaaaatgagc ctcagtctgc accaaaagaa aataagccct
      541 atgccttgaa ttcagaaaag aactttccaa tggacatgag tgatgattat gagacacagc
      601 agtggccaga aagaaagctt aagcacatgc aattccctcc tatgtatgaa gagaattcca
      661 gggataaccc ctttaaacgc acaaatgaaa tagtggagga acaatatact cctcaaagcc
      721 ttgctacatt ggaatctgtc ttccaagagc tggggaaact gacaggacca aacaaccaga
      781 aacgtgagag gatggatgag gagcaaaaac tttatacgga tgatgaagat gatatctaca
      841 aggctaataa cattgcctat gaagatgtgg tcgggggaga agactggaac ccagtagagg
      901 agaaaataga gagtcaaacc caggaagagg tgagagacag caaagagaat atagaaaaaa
      961 atgaacaaat caatgatgag atgaaacgct cagggcagct tggcatccag gaagaaggtc
     1021 ttcggaaaga gagtaaagac caactctcag atgatgtctc caaagtaatt gcctatttga
     1081 aaaggttagt aaatgctgca ggaagtggga ggttacagaa tgggcaaaat ggggaaaggg
     1141 ccaccaggct ttttgagaaa cctcttgatt ctcagtctat ttatcagctg attgaaatct
     1201 caaggaattt acagataccc ccagaagact taattgagat gctcaaaact ggggagaagc
     1261 cgaatggatc agtggaaccg gagcgggagc ttgaccttcc tgttgaccta gatgacatct
     1321 cagaggctga cttagaccat ccagacctgt tccaaaatag gatgctctcc aagagtggct
     1381 accctaaaac acctggtggt gctgggactg aggccctacc agacgggctc agtgttgagg
     1441 atattttaaa tcttttaggg atggagagtg cagcaaatca gaaaacgtcg tattttccca
     1501 atccatataa ccaggagaaa gttctgccaa ggctccctta tggtgctgga agatctagat
     1561 cgaaccagct tcccaaagct gcctggattc cacatgttga aaacagacag atggcatatg
     1621 aaaacctgaa cgacaaggat caagaattag gtgagtactt ggccaggatg ctagttaaat
     1681 accctgagat cattaattca aaccaagtga agcgagttcc tggtcaaggc tcatctgaag
     1741 gtgacctgca ggaagaggaa caaattgagc aggccatcaa agagcatttg aatcaaggca
     1801 gctctcagga gactgacaag ctggccccgg tgagcaaaag gttccctgtg gggcccccga
     1861 agaatgatga taccccaaat aggcagtact gggatgaaga tctgttaatg aaagtgctgg
     1921 aatacctcaa ccaagaaaag gcagaaaagg gaagggagca tattgctaag agagcaatgg
     1981 aaaatatgta agctgctttc attaattacc ctactttcat tcctcccacc ccaagcaaat
     2041 cccaacattt ctcttcagtg tgttgacttc tatcctgtta acactgtaat atctttaaat
     2101 gatgtacagg cagatgaaac caggtcactg gggagtctgc ttcatttcct ctgagctgtt
     2161 atcttgtgta tggatatgtg taaatgttat gactccttga taaaaaattt attatgtcca
     2221 ttattcaaga aagatatcta tgactgtgtt taatagtata tctaatggct gtggcattgt
     2281 tgatgctcac atatgataaa aaagtgtcct ataattctat tgaaagtttt taatatttat
     2341 tgaattattt tgttactgtc tgtagtgttt tgtggagtac tggaccaaaa aaataaagca
     2401 ttataaatat atagttttat ttataaggcc ttttctattg tgtgttttac tgttgattaa
     2461 taaatgttat ttctggacaa aaaaaaaaaa aaaa
//