LOCUS BC022465 2215 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens plasticity related gene 3, mRNA (cDNA clone MGC:26189
IMAGE:4797229), complete cds.
ACCESSION BC022465
VERSION BC022465.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2215)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2215)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46877063.
FEATURES Location/Qualifiers
source 1..2215
/db_xref="H-InvDB:HIT000039560"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26189 IMAGE:4797229"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2215
/gene="PRG-3"
/gene_synonym="MGC26189"
/gene_synonym="RP11-35N6.1"
/db_xref="GeneID:54886"
CDS 133..1110
/gene="PRG-3"
/gene_synonym="MGC26189"
/gene_synonym="RP11-35N6.1"
/codon_start=1
/product="plasticity related gene 3"
/protein_id="AAH22465.1"
/db_xref="GeneID:54886"
/translation="MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVH
IQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESL
IAQEKTILTGECCYLNPLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVC
KPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITST
IKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVV
HNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHSASMTEVT"
BASE COUNT 633 a 466 c 438 g 678 t
ORIGIN
1 gtggctcgga ccgccgcctg aatgtacctc gctcccggga gccggacggc ccagtagggc
61 gcactggagg acgctccgct gcgggagcct ggacagtttt tgacggtgca gtcttgctat
121 atggtgtgag aaatggctgt aggaaacaac actcaacgaa gttattccat catcccgtgt
181 tttatatttg ttgagcttgt catcatggct gggacagtgc tgcttgccta ctacttcgaa
241 tgcactgaca cttttcaggt gcatatccaa ggattcttct gtcaggacgg agacttaatg
301 aagccttacc cagggacaga ggaagaaagc ttcatcaccc ctctggtgct ctattgtgtg
361 ctggctgcca ccccaactgc tattattttt attggtgaga tatccatgta tttcataaaa
421 tcaacaagag aatccctgat tgctcaggag aaaacaattc tgaccggaga atgctgttac
481 ctgaacccct tacttcgaag gatcataaga ttcacagggg tgtttgcatt tggacttttt
541 gctactgaca tttttgtaaa cgccggacaa gtggtcactg ggcacttaac gccatacttc
601 ctgactgtgt gcaagccaaa ctacaccagt gcagactgcc aagcgcacca ccagtttata
661 aacaatggga acatttgtac tggggacctg gaagtgatag aaaaggctcg gagatccttt
721 ccctccaaac acgctgctct gagcatttac tccgccttat atgccacgat gtatattaca
781 agcacaatca agacgaagag cagtcgactg gccaagccgg tgctgtgcct cggaactctc
841 tgcacagcct tcctgacagg cctcaaccgg gtctctgagt atcggaacca ctgctcggac
901 gtgattgctg gtttcatcct gggcactgca gtggccctgt ttctgggaat gtgtgtggtt
961 cataacttta aaggaacgca aggatctcct tccaaaccca agcctgagga tccccgtgga
1021 gtacccctaa tggctttccc aaggatagaa agccctctgg aaaccttaag tgcacagaat
1081 cactctgcgt ccatgaccga agttacctga gacgactgat gtgtcacaag ctgtttttta
1141 aaatcatctt ccaattctat acttcaaaac acacagttgc tcaatgtcaa actgtgatga
1201 caaatattac gtttatctag ttagaagcta atgttttgta cattttttgt atgaggaagt
1261 gatgtagctt gccctgattt tttttttttt ttttggtcag ctttaatata tttatgccag
1321 aattttaaaa ccaacaaaat tttcttgttc aagcgtgcat tgaagaacca catttattca
1381 atggttgacg ttgttttgtg atatttgtac acaaattttc ttttctcagt tttataaaca
1441 cagaagtaaa tataacaatt cactttaaac ttttattacc acagttgctg cctcctccag
1501 aatttttgaa ttttaataaa aggcaaactt ttgagctgca ggaaggacaa tgttggttaa
1561 taataaatct caaagtcaat tgtagaaaaa aaattgtctt caaaaagaat gttgcactct
1621 gatctcttaa caaattgtta cgttcaaagt ttaaagtgat atattaacaa agtcacctag
1681 ttatacaaac aattgtcaga gaattctgga tttggagggt attggggtta tatgattctt
1741 tcttagataa tggcctctac taaataactc aagatctttc tggaatgtct tctggcaggc
1801 aggtgccact gtcagctttt ctccaaaaag cagccaacat cagcctcccc tgtcaactca
1861 acagttttgt atctcatatt atatggactt tatatgaaaa tgaatatttt acagtttgca
1921 cagtattatt ttacagaaaa ggaatcagag aatctacaac atagggcccc agaacaacag
1981 tttcactttg tggcttttaa ttattctaga attttaactg catctcattt ttctagcatg
2041 gtgagaacta atatgtaact cctttgattg aaggagctct tttgtccgta cctatcagaa
2101 tgttttcttg acacttccat gttggctctt ctcagctttt tttgtacata tttttttttt
2161 ctaaagagaa gaaaaagtta tcacaaaatg taaaaaaaga aaaaaaaaaa aaaaa
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