LOCUS BC022462 2335 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, mRNA
(cDNA clone MGC:26135 IMAGE:4816713), complete cds.
ACCESSION BC022462
VERSION BC022462.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2335)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2335)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359927.
FEATURES Location/Qualifiers
source 1..2335
/db_xref="H-InvDB:HIT000039557"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26135 IMAGE:4816713"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2335
/gene="ST6GALNAC1"
/gene_synonym="HSY11339"
/gene_synonym="ST6GalNAcI"
/db_xref="GeneID:55808"
CDS 56..1471
/gene="ST6GALNAC1"
/gene_synonym="HSY11339"
/gene_synonym="ST6GalNAcI"
/codon_start=1
/product="ST6GALNAC1 protein"
/protein_id="AAH22462.1"
/db_xref="GeneID:55808"
/translation="MRSCLWRCRHLSQGVQWSLLLAVLVFFLFALPSFIKEPQTKPSR
HQRTENIKERSLQSLAKPKSQAPTRARRTTIYAEPVPENNALNTQTQPKAHTTGDRGK
EANQAPPEEQDKVPHTAQRAAWKSPEKEKTMVNTLSPRGQDAGMASGRTEAQSWKSQD
TKTTKGNGGQTRKLTASRTVSEKHQGKAATTAKTLIPKSQHRMLAPTGAVSTRTRQKG
VTTAVIPPKEKKPQATPPPAPFQSPTTQRNQRLKAANFKSEPRWDFEEKYSFEIGGLQ
TTCPDSVKIKASKSLWLQKLFLPNLTLFLDSRHFNQSEWDRLEHFAPPFGFMELNYSL
VQKVVTRFPPVPQQQLLLASLPAGSLRCITCAVVGNGGILNNSHIGQEIDSHDYVFRL
SGALIKGYEQDVGTRTSFYGFTAFSLTQSLLILGNRGFKNVPLGKAQTPGSFSGSPAH
GQVPVAAPRLSPIHEEQVSEV"
BASE COUNT 649 a 647 c 569 g 470 t
ORIGIN
1 ctacatcaag gccccaggac atgcagaacc ttcctctaga acccgaccca ccaccatgag
61 gtcctgcctg tggagatgca ggcacctgag ccaaggcgtc cagtggtcct tgcttctggc
121 tgtcctggtc ttctttctct tcgccttgcc ctcttttatt aaggagcctc aaacaaagcc
181 ttccaggcat caacgcacag agaacattaa agaaaggtct ctacagtccc tggcaaagcc
241 taagtcccag gcacccacaa gggcaaggag gacaaccatc tatgcagagc cagtgccaga
301 gaacaatgcc ctcaacacac aaacccagcc caaggcccac accaccggag acagaggaaa
361 ggaggccaac caggcaccgc cggaggagca ggacaaggtg ccccacacag cacagagggc
421 agcatggaag agcccagaaa aagagaaaac catggtgaac acactgtcac ccagagggca
481 agatgcaggg atggcctctg gcaggacaga ggcacaatca tggaagagcc aggacacaaa
541 gacgaccaaa ggaaatgggg gccagaccag gaagctgacg gcctccagga cggtgtcaga
601 gaagcaccag ggcaaagcgg caaccacagc caagacgctc attcccaaaa gtcagcacag
661 aatgctggct cccacaggag cagtgtcaac aaggacgaga cagaaaggag tgaccacagc
721 agtcatccca cctaaggaga agaaacctca ggccacccca ccccctgccc ctttccagag
781 ccccacgacg cagagaaacc aaagactgaa ggccgccaac ttcaaatctg agcctcggtg
841 ggattttgag gaaaaataca gcttcgaaat aggaggcctt cagacgactt gccctgactc
901 tgtgaagatc aaagcctcca agtcgctgtg gctccagaaa ctctttctgc ccaacctcac
961 tctcttcctg gactccagac acttcaacca gagtgagtgg gaccgcctgg aacactttgc
1021 accacccttt ggcttcatgg agctcaacta ctccttggtg cagaaggtcg tgacacgctt
1081 ccctccagtg ccccagcagc agctgctcct ggccagcctc cccgctggga gcctccggtg
1141 catcacctgt gccgtggtgg gcaacggggg catcctgaac aactcccaca taggccagga
1201 gatagacagt cacgactacg tgttccgatt gagcggagct ctcattaaag gctacgaaca
1261 ggatgtgggg actcggacat ccttctacgg ctttaccgcc ttctccctga cccagtcact
1321 ccttatattg ggcaatcggg gtttcaagaa cgtgcctctt gggaaggcac agaccccagg
1381 aagcttttcg ggaagccctg cacatggaca ggtacctgtt gctgcaccca gactttctcc
1441 gatacatgaa gaacaggttt ctgaggtcta agaccctgga tggtgcccac tggaggatat
1501 accgccccac cactggggcc ctcctgctgc tcactgccct tcagctctgt gaccaggtga
1561 gtgcttatgg cttcatcact gagggccatg agcgcttttc tgatcactac tatgatacat
1621 catggaagcg gctgatcttt tacataaacc atgacttcaa gctggagaga gaagtctgga
1681 agcggctaca cgatgaaggg ataatccggc tgtaccagcg tcctggtccc ggaactgcca
1741 aagccaagaa ctgaccgggg ccagggctgc catggtctcc ttgcctgctc caaggcacag
1801 gatacagtgg gaatcttgag actctttggc catttcccat ggctcagact aagctccaag
1861 cccttcaaga gttccaaggg aacacttgaa ccatggacaa gactctctca agatggcaaa
1921 tggctaattg aggttctgaa gttcttcagt acattgctgt aggtcctgag gccagggatt
1981 tttaattaaa tggggtgatg ggtggccaat accacaattc ctgctgaaaa acactcttcc
2041 agtccaaaag cttcttgata cagaaaaaag agcctggatt tacagaaaca tatagatctg
2101 gtttgaattc cagatcgagt ttacagttgt gaaatcttga aggtattact taacttcact
2161 acagattgtc tagaagacct ttctaggagt tatctgattc tagaagggtc tatacttgtc
2221 cttgtcttta agctatttga caactccacg tgttgtagaa aactgataat aatacaaatg
2281 attgttgtcc atggaaaggc aaataaattt tctacagcga aaaaaaaaaa aaaaa
//