LOCUS BC022461 2938 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier organic anion transporter family,
member 1C1, mRNA (cDNA clone MGC:26093 IMAGE:4801171), complete
cds.
ACCESSION BC022461
VERSION BC022461.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2938)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2938)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC022461.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361594.
FEATURES Location/Qualifiers
source 1..2938
/db_xref="H-InvDB:HIT000039556"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26093 IMAGE:4801171"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2938
/gene="SLCO1C1"
/gene_synonym="OATP-F"
/gene_synonym="OATP1"
/gene_synonym="OATP1C1"
/db_xref="GeneID:53919"
/db_xref="HGNC:HGNC:13819"
CDS 98..2236
/gene="SLCO1C1"
/gene_synonym="OATP-F"
/gene_synonym="OATP1"
/gene_synonym="OATP1C1"
/codon_start=1
/product="solute carrier organic anion transporter family,
member 1C1"
/protein_id="AAH22461.1"
/db_xref="GeneID:53919"
/db_xref="HGNC:HGNC:13819"
/translation="MDTSSKENIQLFCKTSVQPVGRPSFKTEYPSSEEKQPCCGELKV
FLCALSFVYFAKALAEGYLKSTITQIERRFDIPSSLVGVIDGSFEIGNLLVITFVSYF
GAKLHRPKIIGAGCVIMGVGTLLIAMPQFFMEQYKYERYSPSSNSTLSISPCLLESSS
QLPVSVMEKSKSKISNECEVDTSSSMWIYVFLGNLLRGIGETPIQPLGIAYLDDFASE
DNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLDHITITPKDPQWVGAWWL
GYLIAGIISLLAAVPFWYLPKSLPRSQSREDSNSSSEKSKFIIDDHTDYQTPQGENAK
IMEMARDFLPSLKNLFGNPVYFLYLCTSTVQFNSLFGMVTYKPKYIEQQYGQSSSRAN
FVIGLINIPAVALGIFSGGIVMKKFRISVCGAAKLYLGSSVFGYLLFLSLFALGCENS
DVAGLTVSYQGTKPVSYHERALFSDCNSRCKCSETKWEPMCGENGITYVSACLAGCQT
SNRSGKNIIFYNCTCVGIAASKSGNSSGIVGRCQKDNGCPQMFLYFLVISVITSYTLS
LGGIPGYILLLRCIKPQLKSFALGIYTLAIRVLAGIPAPVYFGVLIDTSCLKWGFKRC
GSRGSCRLYDSNVFRHIYLGLTVILGTVSILLSIAVLFILKKNYVSKHRSFITKRERT
MVSTRFQKENYTTSDHLLQPNYWPGKETQL"
BASE COUNT 889 a 544 c 566 g 939 t
ORIGIN
1 tctgtggtgt gtggtccatc ctcttgctga gcacattgaa aggaactggc tatctttgat
61 ctcttcctcc agatcagagt caaggaatgt gtttataatg gacacttcat ccaaagaaaa
121 tatccagttg ttctgcaaaa cttcagtgca acctgttgga aggccttctt ttaaaacaga
181 atatccgtcc tcagaagaaa agcaaccatg ctgtggtgaa ctaaaggtgt tcttgtgtgc
241 cttgtctttt gtttactttg ccaaagcatt ggcagaaggc tatctgaaga gcaccatcac
301 tcagatagag agaaggtttg atatcccttc ttcactggtg ggagttattg atggtagttt
361 tgaaattggg aatctcttag ttataacatt tgttagctac tttggagcca aacttcacag
421 gccaaaaata attggagcag ggtgtgtaat catgggagtt ggaacactgc taattgcaat
481 gcctcagttc ttcatggagc agtacaaata tgagagatat tctccttcct ccaattccac
541 tctcagcatc tctccgtgtc tcctagagtc aagcagtcaa ttaccagttt cagttatgga
601 aaaatcaaaa tccaaaataa gtaacgaatg tgaagtggac actagctctt ccatgtggat
661 ttatgttttc ctgggcaatc ttcttcgtgg aataggagaa actcccattc agcctttggg
721 cattgcctac ctggatgatt ttgccagtga agacaatgca gctttctata ttgggtgtgt
781 gcagacggtt gcaattatag gaccaatctt tggtttcctg ttaggctcat tatgtgccaa
841 actatatgtt gacattggct ttgtaaacct agatcacata accattaccc caaaagatcc
901 ccagtgggta ggagcctggt ggcttggcta tctaatagca ggaatcataa gtcttcttgc
961 agctgtgcct ttctggtatt taccaaagag tttaccaaga tcccaaagta gagaggattc
1021 taattcttcc tctgagaaat ccaagtttat tatagatgat cacacagact accaaacacc
1081 ccagggagaa aatgcaaaaa taatggaaat ggcaagagat tttcttccat cactgaagaa
1141 tctttttgga aacccagtat acttcctata tttatgtaca agcactgttc agttcaattc
1201 tctgttcggc atggtgacgt acaaaccaaa gtacattgag cagcagtatg gacagtcatc
1261 ctccagggcc aactttgtga tcgggctcat caacattcca gcagtggccc ttggaatatt
1321 ctctgggggg atagttatga aaaaattcag aatcagtgtg tgtggagctg caaaactcta
1381 cttgggatca tctgtctttg gttacctcct atttctttcc ctgtttgcac tgggctgtga
1441 aaattctgat gtggcaggac taactgtctc ctaccaagga accaaacctg tctcttatca
1501 tgaacgagct ctcttttcag attgcaactc aagatgcaaa tgttcagaga caaaatggga
1561 acccatgtgc ggtgaaaatg gaatcacata tgtatcagct tgtcttgctg gttgtcaaac
1621 ctccaacagg agtggaaaaa atattatatt ttacaactgc acttgtgtgg gaattgcagc
1681 ttctaaatcc ggaaattcct caggcatagt gggaagatgt cagaaagaca atggatgtcc
1741 ccaaatgttt ctgtatttcc ttgtaatttc agtcatcaca tcctatactt tatccctagg
1801 tggcatacct ggatacatat tacttctgag gtgcattaag ccacagctta agtcttttgc
1861 cttgggtatc tacacattag caataagagt tcttgcagga atcccagctc cagtgtattt
1921 tggagttttg attgatactt catgcctcaa atggggattt aaaagatgtg gaagtagagg
1981 atcatgcaga ttatatgatt caaatgtctt cagacatata tatttgggac taactgtgat
2041 actgggcaca gtgtcaattc tcctaagcat tgcagtactt ttcattttaa agaaaaatta
2101 tgtttcaaaa cacagaagtt ttataaccaa gagagaaaga acaatggtgt ctacaagatt
2161 ccaaaaggaa aattacacta caagtgatca tctgctacaa cccaactact ggccaggcaa
2221 ggaaactcaa ctttagaaac atgatgactg gaagtcatgt cttctaattg gttgacattt
2281 tgcaaacaaa taaattgtaa tcaaaagagc tctaaatttg taatttcttt ctcctttcaa
2341 aaaatgtcta ctttgttttg gtcctaggca ttaggtaata taactgataa tatactgaaa
2401 tatataatgg aagatgcaga tgataaaact aattttgaac tttttaattt atataaatta
2461 ttttatatca tttacttatt tcactttatt ttgctttgtg ctcattgata tatattagct
2521 gtactcctag aagaacaatt gtctctattg tcacacatgg ttatatttaa agtaatttct
2581 gaactgtgta atgtgtctag agtaagcaaa tactgctaac aattaactca taccttgggt
2641 tccttcaagt attactccta tagtattttc tcccatagct gtcttcatct gtgtatttta
2701 ataatgatct taggatggag cagaacatgg agaggaagat ttcattttaa gctcctcctt
2761 ttccttgaaa tacaataatt tatatagaaa tgtgtagcag caaattatat tggggattag
2821 aattttgaat taatagctct cctactatta atttacatgt gctttttgtg tggcgctata
2881 agtgactatg gttgtaaagt aataaaattg atgttaacat gcaaaaaaaa aaaaaaaa
//