LOCUS BC022451 1535 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens SET domain containing 6, mRNA (cDNA clone MGC:26010
IMAGE:4794299), complete cds.
ACCESSION BC022451
VERSION BC022451.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1535)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1535)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376287.
FEATURES Location/Qualifiers
source 1..1535
/db_xref="H-InvDB:HIT000039548"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26010 IMAGE:4794299"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1535
/gene="SETD6"
/gene_synonym="FLJ21148"
/db_xref="GeneID:79918"
/db_xref="HGNC:HGNC:26116"
CDS 22..1443
/gene="SETD6"
/gene_synonym="FLJ21148"
/codon_start=1
/product="SETD6 protein"
/protein_id="AAH22451.1"
/db_xref="GeneID:79918"
/db_xref="HGNC:HGNC:26116"
/translation="MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERA
GGRRTRGGARAALTSPPAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHT
CSIGGLLERERVALQSQSGWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWP
EEERRCLLQGTGVPEAVEKDLANISSEYQSIVLPFMEAHPDLFSLGVRSLELYHQLVA
LVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIP
KGHEIFNTYGQMANWQLIHMYGFVEPYPDNTDDTADIQMVTVREAALQGTKTEAERHL
VYERWDFLCKLEMVGEEGAFVIGREEVLTEEELTTTLKVLCMPAEEFRELKDQDGGGD
DKREEGSLTITNIPKLKASWRQLLQNSVLLTLQTYATDLKTDQGLLSNKEVYAKLSWR
EQQALQVRYGQKMILHQLLELTS"
BASE COUNT 373 a 395 c 471 g 296 t
ORIGIN
1 gaaaaaacgc gctcttagac catggcgacc caggcgaagc gtccacgggt ggcggggccc
61 gtggacggcg gcgacctgga tcctgtggcc tgcttcctga gctggtgccg gcgggtgggg
121 ctggagctga gtcccaaggt gagcgagcga gccggcgggc ggaggacccg cggcggggcg
181 cgggctgccc tgaccagccc tcctgctcag gtggcggtca gccggcaggg cacggtggcc
241 ggctacggca tggtggcccg ggagagcgtg caggccggag agttgctgtt cgtggtgccg
301 cgggccgcgc tcctgtcgca gcacacctgc tccatcggcg gcctgctgga gcgagagcga
361 gttgcgctgc agagccagtc gggctgggtg ccactgctgc tggcgctgct ccacgagctg
421 caggccccgg cctcacgctg gaggccctac tttgcgctct ggcccgagct gggccgcttg
481 gagcacccga tgttctggcc agaggaggag cgccggtgcc tgctccaggg cacaggcgta
541 cctgaggccg tggagaagga tttggccaac atcagcagcg agtaccagtc catcgtgctg
601 cccttcatgg aagcccaccc cgatctcttc agcctcgggg ttcgctccct agaactctac
661 caccagctgg tggcccttgt gatggcctat agctttcagg aaccactgga ggaagaagag
721 gatgaaaagg agcccaactc ccccgtgatg gtgcctgctg cagacatact aaaccactta
781 gccaatcaca acgccaatct agaatactct gcgaattgtc ttcggatggt agccactcag
841 cccattccta aaggccatga gattttcaac acttatgggc aaatggctaa ctggcaactg
901 attcatatgt acggttttgt tgaaccatat cctgacaaca cagatgacac agctgacatt
961 cagatggtga cagttcgtga ggcagcatta cagggaacaa aaactgaagc tgaaaggcac
1021 ctagtgtacg agcgctggga tttcctatgc aaactggaga tggtagggga agagggagcc
1081 tttgtgatag ggagggagga ggtgctgact gaagaggagc tgaccaccac actaaaggta
1141 ctgtgcatgc ctgctgagga gttcagagag cttaaagacc aggatggagg gggagatgat
1201 aaaagggaag agggcagcct gacgatcaca aatattccca agctcaaagc atcgtggaga
1261 cagctgcttc aaaacagtgt tctactgact ttgcagacct atgccacaga cttaaaaact
1321 gaccaaggtt tactcagtaa taaggaagtc tatgcgaaac tcagctggag ggaacagcaa
1381 gccttacagg ttcgctatgg tcagaagatg atcttacatc agttgttgga actgacaagt
1441 tagcagtttc cctgttccct gaaggaacgg caataagaac tttattctaa gctaatactc
1501 attgatgttt gaaaaagagg aaaaaaaaaa aaaaa
//