LOCUS BC022320 1049 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens S100 calcium binding protein Z, mRNA (cDNA clone
MGC:22642 IMAGE:4696667), complete cds.
ACCESSION BC022320
VERSION BC022320.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1049)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1049)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18640743.
FEATURES Location/Qualifiers
source 1..1049
/db_xref="H-InvDB:HIT000039468"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22642 IMAGE:4696667"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1049
/gene="S100Z"
/gene_synonym="Gm625"
/gene_synonym="S100-zeta"
/db_xref="GeneID:170591"
/db_xref="HGNC:HGNC:30367"
/db_xref="MIM:610103"
CDS 332..631
/gene="S100Z"
/gene_synonym="Gm625"
/gene_synonym="S100-zeta"
/codon_start=1
/product="S100 calcium binding protein Z"
/protein_id="AAH22320.1"
/db_xref="GeneID:170591"
/db_xref="HGNC:HGNC:30367"
/db_xref="MIM:610103"
/translation="MPTQLEMAMDTMIRIFHRYSGKARKRFKLSKGELKLLLQRELTE
FLSCQKETQLVDKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK"
BASE COUNT 338 a 218 c 207 g 286 t
ORIGIN
1 ggagtctgga ccacgcagac tcagaacagc actactcaca gcagggcctc ttgctcgctc
61 tagctgctgg gaggaaaacg gcttgctaat ctccacgccc agaaattcag acaagagcat
121 tctccttatc tcatctgcac aggaagcagg tctaagtgta atttcacaag cccctgactc
181 tgtgtagaca cccagctctc cagaaaaatg ctttgaagac aaaggataca gcatacagtc
241 ccgtgtctcg gctgagtcat cgcattcctt aatagtgtct tctccccggg tttggtggcc
301 tgcttctgga gtggtcagtt ctgctgccga catgcccacc cagctcgaga tggccatgga
361 caccatgatt agaatcttcc accgctattc tggcaaggca aggaagagat tcaagctcag
421 caagggggaa ctgaaactgc tcctgcagcg agagctcacg gaattcctct cgtgccaaaa
481 ggaaacccag ttggttgata agatagtgca ggacctggat gccaataagg acaacgaagt
541 ggattttaat gaattcgtgg tcatggtggc agctctgaca gttgcttgta atgattactt
601 tgtagaacaa ttgaagaaga aaggaaaata aaggtaagta ataagctcat ctaaaggcag
661 aaatatatcc aaagttatgt acttaatgtt catttatacc cttcagatct atagacccag
721 taatgtcatt tatagctata atatccagtg catatattaa taattaattg ctactattga
781 attatgtgcc ccttaaaata ttgactttat gtaaatattc taaatctcat atgccctacc
841 tgaaacttgc ctgtattatt aagaggctat atgcatcttt ttggtttgtc aaaacgaggg
901 cattacaaaa atttagctac tttcaaatga gacttgaatt tggcaaattt ctaagatgga
961 cattcatatc cttaaattgt attttgaact tcttacccta ttaaaaaaaa ttaactggca
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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