LOCUS BC022301 2306 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens starch binding domain 1, mRNA (cDNA clone MGC:22536
IMAGE:4694574), complete cds.
ACCESSION BC022301
VERSION BC022301.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503976.
FEATURES Location/Qualifiers
source 1..2306
/db_xref="H-InvDB:HIT000039456"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22536 IMAGE:4694574"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2306
/gene="STBD1"
/gene_synonym="GENEX3414"
/gene_synonym="GENX-3414"
/db_xref="GeneID:8987"
/db_xref="HGNC:HGNC:24854"
/db_xref="MIM:607406"
CDS 71..1147
/gene="STBD1"
/gene_synonym="GENEX3414"
/gene_synonym="GENX-3414"
/codon_start=1
/product="starch binding domain 1"
/protein_id="AAH22301.1"
/db_xref="GeneID:8987"
/db_xref="HGNC:HGNC:24854"
/db_xref="MIM:607406"
/translation="MGAVWSALLVGGGLAGALFVWLLRGGPGDTGKDGDAEQEKDAPL
GGAAIPGGHQSGSSGLSPGPSGQELVTKPEHLQESNGHLISKTKDLGKLQAASWRLQN
PSREVCDNSREHVPSGQFPDTEAPATSETSNSRSYSEVSRNESLESPMGEWGFQKGQE
ISAKAATCFAEKLPSSNLLKNRAKEEMSLSDLNSQDRVDHEEWEMVPRHSSWGDVGVG
GSLKAPVLNLNQGMDNGRSTLVEARGQQVHGKMERVAVMPAGSQQVSVRFQVHYVTST
DVQFIAVTGDHECLGRWNTYIPLHYNKDGFWSHSIFLPADTVVEWKFVLVENGGVTRW
EECSNRFLETGHEDKVVHAWWGIH"
BASE COUNT 654 a 472 c 594 g 586 t
ORIGIN
1 gggctctgtg tgcgtgacct gagccccggt cccagtccct gtagtctcct gcggccgcgg
61 cctctcagcc atgggcgccg tctggtccgc cctgctggtt ggagggggtc tggccggagc
121 acttttcgtt tggctgctgc ggggcggccc tggcgacacc gggaaggacg gggatgcgga
181 gcaggagaaa gacgcccctc ttgggggagc tgcgattccg ggaggccatc agagtggcag
241 cagcggactg agccctggac cttccgggca ggagctggtc accaaaccag agcatcttca
301 agaaagcaat ggacatttga tttctaagac caaagacctt ggtaaactgc aagcagcatc
361 atggagattg cagaatcctt ccagggaagt ctgtgacaat tcaagagaac atgttccttc
421 tggacagttt ccagacacag aagctccagc tacctctgag accagtaact ctaggagtta
481 ctctgaagtt tcaagaaatg aaagccttga atctcctatg ggagaatggg gattccaaaa
541 aggacaagag atatctgcta aagcagctac atgttttgca gagaagttgc cttctagcaa
601 cctgctcaag aacagagcta aagaagaaat gagcctctct gatttgaaca gtcaggaccg
661 ggttgaccac gaggagtggg aaatggtgcc taggcactca tcttgggggg atgttggtgt
721 gggtggcagt cttaaggctc cagtgttaaa cctaaaccag ggaatggaca atggaagaag
781 cactttggtg gaagcaagag gtcagcaagt gcatgggaaa atggaaaggg tagcagtgat
841 gcctgcaggg tctcagcaag ttagtgtcag gttccaggtc cattatgtca caagcactga
901 tgtgcaattc attgcagtaa ctggagacca tgagtgtctt gggagatgga acacttacat
961 cccactccac tataacaagg atgggttctg gtctcattcc attttcctgc ctgcagatac
1021 agtggtggag tggaagtttg tgttggtaga gaatggggga gttacccgct gggaagaatg
1081 cagcaataga ttcctagaaa ctggccatga ggataaagtg gttcacgcat ggtgggggat
1141 tcactgattc agtttgcaaa gtaatggaga agctgtagaa caatgtggaa gaggctgagg
1201 ttgtggaaca cactgaataa aataaaggca gtgtgactcc aaattcagcc atctgaattg
1261 tttaaatttg ctagtggatt ttgtctactg tgcagaaata tatatgtcta atgtgcagaa
1321 atatatatgt gtgtatgtgt gtatatatat gcacacacac acagataatg cttccagtga
1381 atgtgaactt cttttccctg tggcactgat tgacagactt gtgctgatcc attattactt
1441 tagggcttga ttctcttggg gagtgacttg gctaagcttc aggtgtaaac tgtggtcacg
1501 gagcaaaaac attaaccagc tgcccagggt tcaagcttga gcctttaggt gatctttaaa
1561 ctatggtagt aaaataagcc tcactcaaac atagctgact tcctattggt acagcttgaa
1621 aagcactttt tactacatac acattttatg cttaaaaagt taacatgata cgaaactgtg
1681 attagaaaat atctggtctg gatgtgatta gtaaggatac aagataatgt tctaagactg
1741 cctaatgctt tttgtttgat tttcatctgc caggcgttgt tatgtgctat gagggtagca
1801 agtacgtctt tgtcttaatg atctaaggct ggtgtagaaa caaagggcct aatgagaacc
1861 aatcatcatg gaagtcagtt gcgggggcag cccataagga aagggaaagt gagtggggtt
1921 gggcataggc tgagtgaggt ggcctgaatg acacctctta gaggactgtg aagtacaggc
1981 acagcccgac tgcagggagg gatgcaccca tcatttaccc atgggagcat ctgtaggacc
2041 atctctctcc cacttcttct cccctccccc accgcatctg gccagatgga ctgtcctaca
2101 gcaatcgttt ccatctgtca ccctcttccc tctcctttca taccagtcac tatcttgggt
2161 aacaaattta tacaggacag tggtacagaa atacatcttt gctctgagaa tacagcaaat
2221 attaacttaa attattataa ctgaacaaat aataaaacct gaattttaat atcttcaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaaa
//