LOCUS BC022288 2634 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens calsequestrin 2 (cardiac muscle), mRNA (cDNA clone
MGC:22461 IMAGE:4289141), complete cds.
ACCESSION BC022288
VERSION BC022288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2634)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2634)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557408.
FEATURES Location/Qualifiers
source 1..2634
/db_xref="H-InvDB:HIT000039450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22461 IMAGE:4289141"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2634
/gene="CASQ2"
/gene_synonym="PDIB2"
/db_xref="GeneID:845"
/db_xref="HGNC:HGNC:1513"
/db_xref="MIM:114251"
CDS 174..1373
/gene="CASQ2"
/gene_synonym="PDIB2"
/codon_start=1
/product="calsequestrin 2 (cardiac muscle)"
/protein_id="AAH22288.1"
/db_xref="GeneID:845"
/db_xref="HGNC:HGNC:1513"
/db_xref="MIM:114251"
/translation="MKRTHLFIVGIYFLSSCRAEEGLNFPTYDGKDRVVSLSEKNFKQ
VLKKYDLLCLYYHEPVSSDKVTQKQFQLKEIVLELVAQVLEHKAIGFVMVDAKKEAKL
AKKLGFDEEGSLYILKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIISSKLEVQAFER
IEDYIKLIGFFKSEDSEYYKAFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNEVDFYE
PFMDEPIAIPNKPYTEEELVEFVKEHQRPTLRRLRPEEMFETWEDDLNGIHIVAFAEK
SDPDGYEFLEILKQVARDNTDNPDLSILWIDPDDFPLLVAYWEKTFKIDLFRPQIGVV
NVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDD
SDDDDDE"
BASE COUNT 787 a 545 c 587 g 715 t
ORIGIN
1 agagctggct ggacccaagg aggtgaagag tcacttttca gccccaggaa gggcaaagaa
61 gagagaaaat cagcctgtct gctctctcct tggctcaaca aggcctctaa cagtcttctg
121 tcctctattc tgcacacggc atatttggga acgagaaaca aaagttttcc caaatgaaga
181 gaactcactt gtttattgtg gggatttatt ttctgtcctc ttgcagggca gaagaggggc
241 ttaatttccc cacatatgat gggaaggacc gagtggtaag tctttccgag aagaacttca
301 agcaggtttt aaagaaatat gacttgcttt gcctctacta ccatgagccg gtgtcttcag
361 ataaggtcac gcaaaaacag ttccaactga aagaaatcgt gcttgagctt gtggcccagg
421 tccttgaaca taaagctata ggctttgtga tggtggatgc caagaaagaa gccaagcttg
481 ccaagaaact gggttttgat gaagaaggaa gcctgtatat tcttaagggt gatcgcacaa
541 tagagtttga tggcgagttt gcagctgatg tcttggtgga gttcctcttg gatctaattg
601 aagacccagt ggagatcatc agcagcaaac tggaagtcca agccttcgaa cgcattgaag
661 actacatcaa actcattggc tttttcaaga gtgaggactc agaatactac aaggcttttg
721 aagaagcagc tgaacacttc cagccttaca tcaaattctt tgccaccttt gacaaagggg
781 ttgcaaagaa attatctttg aagatgaatg aggttgactt ctatgagcca tttatggatg
841 agcccattgc catccccaac aaaccttaca cagaagagga gctggtggag tttgtgaagg
901 aacaccaaag acccactcta cgtcgcctgc gcccagaaga aatgtttgaa acatgggaag
961 atgatttgaa tgggatccac attgtggcct ttgcagagaa gagtgatcca gatggctacg
1021 aattcctgga gatcctgaaa caggttgccc gggacaatac tgacaacccc gatctgagca
1081 tcctgtggat cgacccggac gactttcctc tgctcgttgc ctactgggag aagactttca
1141 agattgacct attcaggcca cagattgggg tggtgaatgt cacagatgct gacagtgtct
1201 ggatggagat tccagatgat gacgatcttc caactgctga ggagctggag gactggattg
1261 aggatgtgct ttctggaaag ataaacactg aagatgatga tgaagatgat gatgatgatg
1321 ataattctga tgaagaggat aatgatgaca gtgatgatga tgatgatgaa tagcccaact
1381 ccaaacaatt ctgatgaaaa caaaatcaca gcacccacta ccatacagac agcacaaggt
1441 ggcagcaagc aattctgccc cacacccagc cagctccttt cccttttcca tcatctcttt
1501 tcccactccc tttgcgtcag gagcagcatc attcagcaaa tgccttttca aatgcagcaa
1561 tcccacttag cagggacagg agaaaaatta ttcccatgtt gactgtcttg actgtcacgg
1621 aacagatctt gttctttgct ggaccatcaa gggtcatggc agtgcctgaa catggcagtc
1681 tagggtgaac aatcccctaa cacaagttta cttgtctttg attatgacag taacaaaatt
1741 gacagctttc taactcacag gcatagagtg accttttaat cagagcccag ggaagacaca
1801 tgattaatga tttagctccc tccatacctc gaacatcagt tgggatccct cctctagcca
1861 agatgatcct tcttagagaa ggctcagcct tggaagcaaa cttataaatc atattctcat
1921 ggctttgtta aacttatttc aagtgatggt cattcatatc actatgaact tggatattca
1981 agcctttgga tggctatgga gaggccttga aatgtgtaca ggtgtcacca tcatttctag
2041 tatattagga aactgggatg ggaggttgat ttgctctcta aacttccctc tagttggcaa
2101 gtctcacata ttcatcagca ggagtggagg gtgggggaaa actagaaaga tgaaaacttt
2161 tacatttttc tgatgggttc atgtctctga ttgggtcagc tggcttccta gcctaagctg
2221 ggatctgaat accccttctc tgtagctgct agtgagcctt cccatttaga ttaaagattg
2281 cttatccagc agtcaattaa ctctccagtt atcagtactc ccacaattgg ccagggcaac
2341 aataattgga gttcatactg atgccctgag gcactgaaaa aaaaaaaaat cccaaagtgc
2401 cttctgagct gtctaaaagt tacattgtgc ttggtagatt tagtgttaag tgtgcagtat
2461 aattttctaa tttattttct caatctttta gcacgtgtaa gacactgtgc aaattttttg
2521 aaaatagagc aatacttttt gtggaatact agctaactaa ttctgtcatt aaactcatat
2581 tttgaaaata ttcagacaat gttataaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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