LOCUS BC022270 2578 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens CDKN2A interacting protein, mRNA (cDNA clone MGC:22346
IMAGE:4697255), complete cds.
ACCESSION BC022270
VERSION BC022270.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2578)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2578)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923039.
FEATURES Location/Qualifiers
source 1..2578
/db_xref="H-InvDB:HIT000039440"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22346 IMAGE:4697255"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2578
/gene="CDKN2AIP"
/gene_synonym="CARF"
/gene_synonym="FLJ20036"
/db_xref="GeneID:55602"
/db_xref="HGNC:HGNC:24325"
CDS 45..1784
/gene="CDKN2AIP"
/gene_synonym="CARF"
/gene_synonym="FLJ20036"
/codon_start=1
/product="CDKN2A interacting protein"
/protein_id="AAH22270.1"
/db_xref="GeneID:55602"
/db_xref="HGNC:HGNC:24325"
/translation="MAQEVSEYLSQNPRVAAWVEALRCDGETDKHWRHRRDFLLRNAG
DLAPAGGAASASTDEAADAESGTRNRQLQQLISFSMAWANHVFLGCRYPQKVMDKILS
MAEGIKVTDAPTYTTRDELVAKVKKRGISSSNEGVEEPSKKRVIEGKNSSAVEQDHAK
TSAKTERASAQQENSSTCIGSAIKSESGNSARSSGISSQNSSTSDGDRSVSSQSSSSV
SSQVTTAGSGKASEAEAPDKHGSSFVSLLKSSVNSHMTQSTDSRQQSGSPKKSALEGS
SASASQSSSEIEVPLLGSSGSSEVELPLLSSKPSSETASSGLTSKTSSEASVSSSVAK
NSSSSGTSLLTPKSSSSTNTSLLTSKSTSQVAASLLASKSSSQTSGSLVSKSTSLASV
SQLASKSSSQTSTSQLPSKSTSQSSESSVKFSCKLTNEDVKQKQPFFNRLYKTVAWKL
VAVGGFSPNVNHGELLNAAIEALKATLDVFFVPLKELADLPQNKSSQESIVCELRCKS
VYLGTGCGKSKENAKAVASREALKLFLKKKVVVKICKRKYRGSEIEDLVLLDEESRPV
NLPPALKHPQELL"
BASE COUNT 805 a 516 c 559 g 698 t
ORIGIN
1 gcctgtctcc cggtgcagct gtgttcgcgg cctgcaggcc caacatggcg caggaggtgt
61 cggagtacct gagccagaac ccgcgggtgg cagcctgggt ggaggcgctg cgctgcgacg
121 gcgagactga caaacactgg cgccaccgcc gggatttttt gcttcgcaac gccggggacc
181 tggcccccgc tggcggcgct gcctccgcta gcacggatga agctgccgac gccgagagcg
241 ggacccgaaa ccggcagctg cagcagctca tctccttttc catggcctgg gcgaaccacg
301 tcttcctcgg gtgccgatac cctcaaaaag ttatggataa aatacttagt atggctgaag
361 gcatcaaagt gacagatgct ccaacctata caacaagaga tgaactggtt gccaaggtga
421 agaaaagagg gatatcgagt agcaatgaag gggtagaaga gccatccaaa aaacgagtta
481 tagaaggaaa aaacagttct gcagttgagc aagatcacgc aaaaacctct gccaagacag
541 aacgtgcatc agctcagcag gaaaacagtt caacgtgtat agggtcggcc atcaaatcag
601 agagtgggaa ctcagctcgg agctctggca tctccagtca gaatagctct acaagtgatg
661 gagatcgatc tgtttccagc caaagcagca gcagcgtttc ctctcaggta acaacggcag
721 gatctgggaa agcttctgaa gcagaagctc cagataaaca cggttcatca tttgtttcct
781 tgctgaaatc cagtgtgaat agtcacatga cccaatccac tgattctaga caacaaagtg
841 gatcacctaa aaagagtgct ttggaaggct cttcagcctc agcttctcaa agcagctcag
901 agatcgaggt gcccttgttg ggctcctcag gaagctcaga ggtagaattg ccactattgt
961 cttccaaacc tagttcagag acagcttcaa gtgggttaac ttccaaaact agttcagagg
1021 caagtgtttc atcatcagtt gctaaaaaca gttcctcatc aggcacatcc ttactgactc
1081 ccaagagcag ctcttcaaca aatacatcgc tgctaacttc caagagcact tcccaggtag
1141 ctgcatcact actagcttcc aagagcagct cccagaccag tggatctctg gtttccaaaa
1201 gcacttcctt agcaagtgtg tcccagttgg cttctaagag tagttctcag actagcacct
1261 cacagttgcc ttctaaaagt acttcacagt caagtgagag ttctgtcaaa ttctcttgca
1321 agttaaccaa tgaagatgtg aaacagaagc aacctttttt caatagacta tataaaacgg
1381 tggcatggaa gttggtagct gttggtggct ttagtcccaa tgtgaatcat ggagagctcc
1441 taaatgcagc tattgaggct ctgaaagcaa cactggatgt attttttgtc ccactaaaag
1501 aattggcaga tctgcctcaa aataagagct ctcaagaaag tattgtttgt gaattgaggt
1561 gcaagtctgt gtatttgggc actggctgtg gaaaaagcaa agaaaatgca aaagcagttg
1621 catcaagaga agcattgaag ttatttctca agaaaaaggt ggtggtaaaa atatgtaaaa
1681 ggaaatacag aggcagtgaa atagaagatc tagtactcct tgatgaagaa tcgaggcctg
1741 taaacttacc tccagcacta aaacatcctc aagaattact ataatgtgtc caaaatatca
1801 ctgcatacaa tatctggtat ttgaagagaa aaactgactt ttgtatagta taaaacacag
1861 gctttcacaa attttgtatt gctttttttc cagttttgca gaaaatttac attctagttc
1921 tcttcacaca gtagcagttg taaataattt atgaatgaca gtacacatta aaaggtatgc
1981 attagcagca tattagtatg ctgttttatt tgctgaagaa aatactgtct tctattttta
2041 atgatacatt aggtacgatg tgtttcggta gagtcctaaa atttttgtac tactttcaat
2101 ttggtgaaaa tgtattaagt tgtctaccat gttttctttt ctagctgaat aaaccacatc
2161 aaaggaaagg gaccacagta tttgaatgtt tgaaagtctg taaagcttaa ggttttaaaa
2221 atgttgcccg taatgttgaa cgtgtctgtt aaaaaataaa agaaaaaata gttgcttcaa
2281 actattttta tgagaagttg taagcatttt ttagatataa agcagtataa agtacttgtt
2341 attttactct gaagttgttt aaaattcacc atgactttga ccgctgaaga ttctttaagc
2401 gggttaattt atgttttgag gtggaataca atttacactt ttttcttaaa aacatgaatg
2461 tgggtttcta tattaagcat attttgtgac tactattaac agattgattt gtttagatat
2521 taaatgcttt aagctatttt acctttacaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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