LOCUS BC022239 2305 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB3A interacting protein (rabin3)-like 1, mRNA (cDNA
clone MGC:21943 IMAGE:4390573), complete cds.
ACCESSION BC022239
VERSION BC022239.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361439.
FEATURES Location/Qualifiers
source 1..2305
/db_xref="H-InvDB:HIT000039421"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21943 IMAGE:4390573"
/tissue_type="Bone, osteosarcoma"
/clone_lib="NIH_MGC_86"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2305
/gene="RAB3IL1"
/db_xref="GeneID:5866"
/db_xref="HGNC:HGNC:9780"
CDS 159..1307
/gene="RAB3IL1"
/codon_start=1
/product="RAB3A interacting protein (rabin3)-like 1"
/protein_id="AAH22239.1"
/db_xref="GeneID:5866"
/db_xref="HGNC:HGNC:9780"
/translation="MWSGPPQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSA
GEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSK
VREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTL
VITSTPASPNRELHPQLLSPTKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGK
EVDTILFAEFQAWRESPTLDKTCPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTL
TIEPVASQTLPTVKVAEVDCSSTNTCALSGLTRTCRHRIRLGDSKSHYYISPSSRARI
TAVCNFFTYIRYIQQGLVRQDAEPMFWEIMRLRKEMSLAKLGFFPQEA"
BASE COUNT 486 a 763 c 698 g 358 t
ORIGIN
1 cgagcccagg cgtctgagac ctactgactg gccgcgggca gggctgacag gcggtggggc
61 ggctcggccc ctggcggagt cggcggcggg cggggacgcg gcgctgggag gacgcggcgg
121 cgctgggaac ggacgcctgg gcgccccgag gcgccgggat gtggagcggc ccaccccagc
181 cagaccaggg cctcccgccg ccccttgcag ctgtcccggt cccctggaag agcacggacc
241 cctgccaagg ccacagggag tccccaggag ccctggtgga gacctctgca ggggaggagg
301 cccaaggcca ggagggcccc gcagccgccc agctggacgt gttgcgcctg cgcagctctt
361 ccatggagat ccgagagaag ggctccgagt tcctgaagga ggagctgcac agagcgcaga
421 aggagctgaa gctaaaggac gaggaatgtg agcggctgtc caaggtgcgg gagcagctag
481 aacaggagct ggaagagctg acggccagcc tgtttgagga agctcacaag atggttcgag
541 aagccaacat gaagcaggcg gcatcagaaa agcagctgaa ggaggctcgg ggcaagatcg
601 acatgctgca ggcagaggtg acagccttga agacactggt catcacgtcc acaccagcct
661 ctcccaaccg cgagcttcac ccccagctgc tgagccccac caaggccggg ccccgaaagg
721 gccactctcg ccacaagagc accagcagca ccctctgccc cgccgtgtgt cccgctgcgg
781 gacacaccct caccccagac agagagggca aggaggtgga cacaatcctg tttgcagagt
841 tccaggcctg gagggaatcc cccaccctgg acaagacctg ccccttcctg gaaagggtgt
901 accgagagga cgtgggcccc tgcctggact tcacaatgca ggagctctcg gtgctggtac
961 gggccgccgt ggaggacaac acgctcacca ttgagccggt ggcttcgcag acgctgccca
1021 cagtgaaggt ggccgaggtt gactgtagca gcaccaacac atgtgccctg agcgggctga
1081 cccgcacctg ccgccaccga atccggctcg gggactccaa aagccattac tacatctcgc
1141 catcttcccg ggccaggatc accgcagtgt gcaacttctt cacctacatc cgctacatcc
1201 agcaaggcct ggtgcggcag gacgcagagc ccatgttctg ggagatcatg aggttgcgga
1261 aggagatgtc actggccaag ctcggcttct tcccccagga ggcttagggc gcggcccagg
1321 cctgaagggg agctctgaga cagagcaaac acccacccca gaacaagccg acacacaggg
1381 agacgggggc ctggagccag ccctgagcca gaggcagaat ggatggacag acaggccatg
1441 gaggcagcac tgagccagca ccacacgtcc atcctgggac agacgggcct ggacttcacg
1501 gcaagacccc cctctcttcc ccactgggtt ctgccaccac caggaggatt tcaagaaagc
1561 accaaagacc agggagctcg gatccatact cggggggcct cagcccttgg gaggggacac
1621 ctgaggcagc cagcgccccc tccccagtcc ccagaactgc ctgcaggtgc cttgttgctg
1681 gcttgtcttc agaaagggac tgttctgggt ggctggatct ccagggtacc ctccacccca
1741 gctgccaagc cctgggccag cagcaccccc ttgtggccat cctgtgcctt gttcccggtg
1801 gcctccctat tggactacta ggaggggctg gcagggcctc catagcacag aattgcccca
1861 aagccttgtt aagatgagtc aagacccctc ccccgcttcc tcccttcctt tcccccttcc
1921 tccctccccc ttcataaagg cctcccttgt caccttccct cccaccccgt ctcagccctg
1981 tgctcctgga ggccctgctc ccaaaaccgc tggaaggact ggggcacttt ctgccacagt
2041 agaacacaga cagggcttca gatcacccac gcctgttttc agctgtgggt ggccatgcag
2101 acacgcgccc tggcatgtgg ggcctgggtg ggcaggcagg acctgggccc tcccacccat
2161 cagagcccac tcaggaccag cgttcggagc tcccacctgg acgcatccct caccacgtcc
2221 ggatttcctt ctttggatgg aatgtaacgc gatctctatt taataaaggc aggctttgtt
2281 ggtaaaaaaa aaaaaaaaaa aaaaa
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