LOCUS       BC022230                4231 bp    mRNA    linear   HUM 07-OCT-2003
DEFINITION  Homo sapiens phosphatidylinositol transfer protein,
            membrane-associated 1, mRNA (cDNA clone MGC:21235 IMAGE:4396491),
            complete cds.
ACCESSION   BC022230
VERSION     BC022230.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4231)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4231)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 27 Row: c Column: 21
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 4758925.
FEATURES             Location/Qualifiers
     source          1..4231
                     /db_xref="H-InvDB:HIT000039416"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:21235 IMAGE:4396491"
                     /tissue_type="Duodenum, adenocarcinoma"
                     /clone_lib="NIH_MGC_88"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..4231
                     /gene="PITPNM1"
                     /gene_synonym="DRES9"
                     /gene_synonym="NIR2"
                     /gene_synonym="PITPNM"
                     /gene_synonym="RDGB"
                     /gene_synonym="RDGB1"
                     /gene_synonym="RDGBA1"
                     /db_xref="GeneID:9600"
     CDS             220..3951
                     /gene="PITPNM1"
                     /gene_synonym="DRES9"
                     /gene_synonym="NIR2"
                     /gene_synonym="PITPNM"
                     /gene_synonym="RDGB"
                     /gene_synonym="RDGB1"
                     /gene_synonym="RDGBA1"
                     /codon_start=1
                     /product="PITPNM1 protein"
                     /protein_id="AAH22230.1"
                     /db_xref="GeneID:9600"
                     /translation="MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILA
                     NRPYTDGPGGSGQYTHKVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCP
                     FVEKFSIEIETYYLPDGGQQPNVFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPR
                     LYHSVKTGRGPLSDDWARTAAQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRV
                     MLRAHRQAWCWQDEWTELSMADIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPST
                     EARSAASNTGTPDGPEAPPGPDASPDASFGKQWSSSSRSSYSSQHGGAVSPQSLSEWR
                     MQNIARDSENSSEEEFFDAHEGFSDSEEVFPKEMTKWNSNDFIDAFASPVEAEGTPEP
                     GAEAAKGIEDGAQAPRDSEGLDGAGELGAEACAVHALFLILHSGNILDSGPGDANSKQ
                     ADVQTLSSAFEAVTRIHFPEALGHVALRLVPCPPICAAAYALVSNLSPYSHDGDSLSR
                     SQDHIPLAALPLLATSSSRYQGAVATVIARTNQAYSAFLRSPEGAGFCGQVALIGDGV
                     GGILGFDALCHSANAGTGSRGSSRRGSMNNELLSPEFGPVRDPLADGVEGLGRGSPEP
                     SALPPQRIPSDMASPEPEGSQNSLQAAPATTSSWEPRRASTAFCPPAASSEAPDGPSS
                     TARLDFKVSGFFLFGSPLGLVLALRKTVMPALEAQMRPACEQIYNLFHAADPCASRLE
                     PLLAPKFQAIAPLTVPRYQKFPLGDGSSLLLADTLQTHSSLFLEELEMLVPSTPTSTS
                     GAFWKGSELATDPPAQPAAPSTTSEVVKILERWWGTKRIDYSLYCPEALTAFPTVTLP
                     HLFHASYWESADVVAFILRQVIEKERPQLAECEEPSIYSPAFPREKWQRKRTQVKIRN
                     VTSNHRASDTVVCEGRPQVLSGRFMYGPLDVVTLTGEKVDVYIMTQPLSGKWIHFGTE
                     VTNSSGRLTFPVPPERALGIGVYPVRMVVRGDHTYAECCLTVVARGTEAVVFSIDGSF
                     TASVSIMGSDPKVRAGAVDVVRHWQDSGYLIVYVTGRPDMQKHRVVAWLSQHNFPHGV
                     VSFCDGLTHDPLRQKAMFLQSLVQEVELNIVAGYGSPKDVAVYAALGLSPSQTYIVGR
                     AVRKLQAQCQFLSDGYVAHLGQLEAGSHSHASSGPPRAALGKSSYGVAAPVDFLRKQS
                     QLLRSRGPSQAEREGPGTPPTTLARGKARSISLKLDSEE"
     misc_feature    220..975
                     /gene="PITPNM1"
                     /gene_synonym="DRES9"
                     /gene_synonym="NIR2"
                     /gene_synonym="PITPNM"
                     /gene_synonym="RDGB"
                     /gene_synonym="RDGB1"
                     /gene_synonym="RDGBA1"
                     /note="IP_trans; Region: Phosphatidylinositol transfer
                     protein"
                     /db_xref="CDD:pfam02121"
     misc_feature    2275..2856
                     /gene="PITPNM1"
                     /gene_synonym="DRES9"
                     /gene_synonym="NIR2"
                     /gene_synonym="PITPNM"
                     /gene_synonym="RDGB"
                     /gene_synonym="RDGB1"
                     /gene_synonym="RDGBA1"
                     /note="DDHD; Region: DDHD domain. The DDHD domain is 180
                     residues long and contains four conserved residues that
                     may form a metal binding site. The domain is named after
                     these four residues. This pattern of conservation of metal
                     binding residues is often seen in phosphoesterase domains.
                     This domain is found in retinal degeneration B proteins,
                     as well as a family of probable phospholipases. It has
                     been shown that this domain is found in a longer C
                     terminal region that binds to PYK2 tyrosine kinase. These
                     proteins have been called N-terminal domain-interacting
                     receptor (Nir1, Nir2 and Nir3). This suggests that this
                     region is involved in functionally important interactions
                     in other members of this family"
                     /db_xref="CDD:pfam02862"
     misc_feature    2947..3660
                     /gene="PITPNM1"
                     /gene_synonym="DRES9"
                     /gene_synonym="NIR2"
                     /gene_synonym="PITPNM"
                     /gene_synonym="RDGB"
                     /gene_synonym="RDGB1"
                     /gene_synonym="RDGBA1"
                     /note="SMP2; Region: COG5083, SMP2, Uncharacterized
                     protein involved in plasmid maintenance [General function
                     prediction only]"
                     /db_xref="CDD:COG5083"
BASE COUNT          791 a         1415 c         1326 g          699 t
ORIGIN      
        1 gcaggggcgc cggcgggcgg atcgagagga aggtcggggc catgggccgg cactgcgcct
       61 cgggagggtc cggccaccgc tggaacccga ggccggggct gggggcgctc cgggctccga
      121 cccacgggcc ggccggccct gcccgggctg ggtgaggggc gcccgcctca agctagagga
      181 ggagcggagg ccgcgcgcgg cccgccgagc gccttcagga tgctcatcaa ggaataccac
      241 attctgctgc ccatgagcct ggacgagtac caggtggccc agctctacat gatccagaaa
      301 aagagccggg aggagtctag tggtgagggc agcggcgtgg agatcctggc caaccggccc
      361 tacacggatg ggcccggggg cagcgggcaa tacacacaca aggtgtacca cgtgggctcc
      421 cacatcccag gctggttccg ggcactgctg cccaaggctg ccctgcaggt agaagaggaa
      481 tcctggaatg cctaccccta cacccgaacc cggtacacct gccctttcgt ggagaaattc
      541 tccattgaaa ttgagaccta ttacctgcct gatggggggc agcagccaaa cgtcttcaac
      601 ctgagcgggg ccgagaggag acagcgcatc ctggacacca tcgacatcgt gcgggatgca
      661 gtggccccag gcgagtacaa agcagaagag gacccccggc tttatcactc ggtcaagacg
      721 ggccgagggc cactgtctga tgactgggca cggacggcgg cacagacggg gccccttatg
      781 tgtgcctata agctgtgcaa ggttgagttc cgctactggg gcatgcaagc caagatcgag
      841 cagttcatcc atgatgtagg tctgcgtcgg gtgatgctgc gggcccaccg ccaggcctgg
      901 tgctggcagg atgagtggac agagctgagc atggctgaca tccgggcact ggaagaggag
      961 actgctcgca tgctggccca gcgcatggcc aagtgcaaca caggcagtga ggggtccgag
     1021 gcccagcccc ccgggaaacc gagcaccgag gcccggtctg cggccagcaa cactggcacc
     1081 cccgatgggc ctgaggcccc cccaggccca gatgcctccc ccgatgccag ctttgggaag
     1141 cagtggtcct catcctcccg ttcctcctac tcatcccaac atggaggggc tgtgtctccc
     1201 cagagcttgt ctgagtggcg catgcagaac attgcccgag actctgagaa cagctccgag
     1261 gaagagttct ttgatgccca cgaaggcttc tcggacagtg aggaggtctt ccccaaggag
     1321 atgaccaagt ggaactccaa tgacttcatt gatgcctttg cctccccagt ggaggcagag
     1381 ggaacgccag agcctggagc cgaggcagct aaaggcattg aggatggggc ccaagcaccc
     1441 agggactcag agggcctgga tggagccggg gagctggggg ctgaggcatg cgcagtccac
     1501 gccctcttcc ttatcctgca cagcggcaac atcctggact caggccctgg agacgccaac
     1561 tccaagcagg cggatgtgca gacgctgagc tccgccttcg aggccgtcac ccgcatccac
     1621 ttccctgagg ccttgggcca cgtggcgctg cgactggtgc cctgtccacc catctgcgcc
     1681 gccgcctatg cccttgtctc caacctgagc ccttacagcc acgatgggga cagcctgtct
     1741 cgctcccaag accacattcc actggctgcc ctgccactgc tggccacctc atcctcccgc
     1801 taccagggcg ccgtggccac cgtcattgcc cgcaccaacc aggcctactc agccttcctg
     1861 cgctcacctg agggtgccgg cttctgtggg caggtcgcac tgattggaga tggtgttggt
     1921 ggcatcctgg gctttgatgc actctgccac agtgctaacg cgggcaccgg gagtcggggc
     1981 agcagccgcc gtgggagcat gaacaatgag ctgctctctc cggagtttgg cccagtgcgg
     2041 gaccccctgg cagatggtgt ggaaggcctg ggtcggggca gcccagaacc ctcggccttg
     2101 cctccccagc gcatccccag cgacatggcc agtcctgagc ccgagggctc tcagaacagc
     2161 cttcaggcag cccccgcaac cacctcctcc tgggagcccc ggcgggcaag cacggccttc
     2221 tgcccacccg ctgccagttc cgaggcacct gacggcccca gcagcactgc ccgccttgac
     2281 ttcaaggtct ctggcttctt cctcttcggc tccccactgg gcctggtgct ggctctgcgc
     2341 aaaactgtga tgcccgccct ggaggcccag atgcgcccag cctgtgaaca gatctacaac
     2401 ctcttccacg cggccgaccc ctgcgcctca cgcctcgagc ccctgctggc cccgaagttc
     2461 caggccatcg ccccactgac cgtgccccgc taccagaagt tccccctggg agatggctca
     2521 tccctgctgc tggccgacac tctgcagacg cactccagcc tctttctgga ggagctggag
     2581 atgctggtgc cctcaacacc cacctctact agcggtgcct tctggaaggg cagtgagttg
     2641 gccactgacc ccccggccca gccagccgcc cccagcacca ccagtgaggt ggttaagatc
     2701 ctggagcgct ggtgggggac caagcggatc gactactcgc tgtactgccc cgaggcgctc
     2761 accgcctttc ccaccgtcac gctgccccac ctcttccacg ccagctactg ggagtccgcc
     2821 gacgtggtgg cgttcatcct gcgccaggtg atcgagaagg agcggccaca gctggcggaa
     2881 tgcgaggagc cgtccatcta cagcccggcc ttccccaggg agaagtggca gcgaaaacgc
     2941 acgcaggtca agatccggaa cgtcacttcc aaccaccggg cgagcgacac ggtggtgtgc
     3001 gagggccgcc cccaggtgct aagcgggcgc ttcatgtacg ggcccctgga cgtcgtcacg
     3061 ctcactggag agaaggtgga tgtctacatc atgacgcagc cgctgtcagg caagtggatc
     3121 cactttggca ccgaagtcac caatagctcg ggccgcctca ccttcccagt tcccccagaa
     3181 cgcgcgctgg gcattggtgt ctaccccgtg cgcatggtgg tcaggggcga ccacacctat
     3241 gccgaatgct gcctgactgt ggtggcccgc ggcacggagg ctgtggtctt cagcatcgac
     3301 ggctccttca ccgccagcgt ctccatcatg ggcagcgacc ccaaggtgcg agctggcgcc
     3361 gtggacgtgg tcaggcactg gcaggactcc ggctacctga tcgtgtatgt cacaggccgg
     3421 ccggatatgc agaagcaccg cgtggtggca tggctgtcgc agcacaactt cccccacggc
     3481 gtcgtctcct tctgcgacgg cctcacccac gacccactac gccagaaggc aatgtttctg
     3541 cagagcctgg tgcaggaggt agaactgaac atcgtggccg gttatgggtc tcccaaagat
     3601 gtggctgtat acgcggcgct ggggctgtcc ccgagccaga cctacatcgt gggccgtgcc
     3661 gtgcggaagc tacaggcgca gtgccagttc ctgtcagacg gctatgtggc ccacctgggc
     3721 cagctggaag cgggctcgca ctcgcatgcc tcctcgggac ccccgagagc tgccttgggc
     3781 aagagcagct atggtgtggc tgcccccgtg gacttcctgc gcaaacagag ccagctgctt
     3841 cgctcgaggg gccccagcca ggcggagcgt gagggcccgg gaacaccacc caccaccctg
     3901 gcacggggca aagcacggag catcagcctg aagctggaca gcgaggagtg aggcccacac
     3961 cagcctggac ctgggttatt tattgacaca cccaaggggc ccgaggggct gcgtgtggga
     4021 ggctggggac ccagactttt ggccccagcg ctggcccccc cagccccaca ccctatatct
     4081 ccgtgtgctc ctcggtgtta cttccctttc atatgagggg acccagcgcc ggggggaggg
     4141 aggagggcgt gggcatgggc gcagaggctt ttccagtgtg tataaatcca tgaaaataaa
     4201 cgccacctgc accccaaaaa aaaaaaaaaa a
//