LOCUS BC022219 3266 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens C2CD2-like, mRNA (cDNA clone MGC:17866 IMAGE:3905001),
complete cds.
ACCESSION BC022219
VERSION BC022219.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3266)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3266)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: i Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42716276.
FEATURES Location/Qualifiers
source 1..3266
/db_xref="H-InvDB:HIT000039415"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17866 IMAGE:3905001"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3266
/gene="C2CD2L"
/gene_synonym="DLNB23"
/db_xref="GeneID:9854"
/db_xref="HGNC:HGNC:29000"
CDS 259..2379
/gene="C2CD2L"
/gene_synonym="DLNB23"
/codon_start=1
/product="C2CD2-like"
/protein_id="AAH22219.1"
/db_xref="GeneID:9854"
/db_xref="HGNC:HGNC:29000"
/translation="MDPGWGQRDVGWAALLILFAASLLTVFAWLLQYARGLWLARARG
DRGPGPALAGEPAGSLRELGVWRSLLRLRATRAGAAEEPGVRGLLASLFAFKSFRENW
QRAWVRALNEQACRNGSSIQIAFEEVPQLPPRASISHVTCVDQSEHTMVLRCQLSAEE
VRFPVSVTQQSPAAVSMETYHVTLTLPPTQLEVNLEEIPGEGLLISWAFTDRPDLSLT
VLPKLQARERGEEQVELSTIEELIKDAIVSTQPAMMVNLRACSAPGGLVPSEKPPMMP
QAQPAIPRPNRLFLRQLRASHLGNELEGTEELCCVAELDNPMQQKWTKPARAGSEVEW
TEDLALDLGPQSRELTLKVLRSSSCGDTELLGQATLPVGSPSRPLSRRQLCPLTPGPG
KALGPAATMAVELHYEEGSPRNLGTPTSSTPRPSITPTKKIELDRTIMPDGTIVTTVT
TVQSRPRIDGKLDSPSRSPSKVEVTEKTTTVLSESSGPSNTSHSSSRDSHLSNGLDPV
AETAIRQLTEPSGRVAKKTPTKRSTLIISGVSKVPIAQDELALSLGYAASLEASVQDD
AGTSGGPSSPPSDPPAMSPGPLDALSSPTSVQEADETTRSDISERPSVDDIESETGST
GALETRSLKDHKVSFLRSGTKLIFRRRPRQKEAGLSQSHDDLSNATATPSVRKKAGSF
SRRLIKRFSFKSKPKANGNPSPQL"
BASE COUNT 662 a 1054 c 945 g 605 t
ORIGIN
1 ctaacgggtc cgactgctga ccaagctagg agagacccgg accacggaga cagagacccc
61 ggcatcgcga cccccgagga cctcctctcc tcgccctgtg gcacccacta gtcctgggca
121 ctcagtcgcg gagagccccc gaccccgcgc gcccagcccc gggggagccc acctcctccc
181 cgcggcccgc ccgggccatg ctcccccggg gcagcggctg agccccagcc gggaccggga
241 tcggagcccg cgcggagcat ggatccgggc tgggggcagc gggacgtggg ctgggcggcc
301 ttgctgatcc tcttcgccgc ctcgctgctc acggtgttcg cctggctgct gcaatatgcc
361 cggggcttgt ggctggcgcg ggcccgcggg gaccggggcc cgggacccgc cttagccggg
421 gaacccgcgg gttccctgcg ggagctgggc gtgtggcgct cgctgctgcg gctgcgggcg
481 actcgggctg gcgccgccga ggagccagga gtccggggcc tcctggcgtc actcttcgcc
541 ttcaagtctt tccgggagaa ctggcagcgg gcttgggtgc gagcgctgaa cgagcaggcc
601 tgcagaaacg ggagctccat ccaaatcgcc tttgaggagg tgccccaact cccacccaga
661 gccagcatca gtcatgtgac ctgcgtagac caatctgagc ataccatggt gctgcgttgc
721 cagctctctg ctgaggaggt gcggttccca gtctctgtga cccagcagtc ccccgctgcc
781 gtctccatgg agacctacca cgtcactctg acactgccac caacacagtt ggaagtcaac
841 ctggaggaaa tccctggtga ggggctgctc atatcctggg ccttcactga tcgcccagat
901 ctcagcctaa cggtgcttcc caagcttcag gccagggaga gaggtgaaga acaagtggag
961 ctctccacaa ttgaggaact gatcaaggat gccatagtca gcacccagcc agccatgatg
1021 gtcaacctca gggcttgctc tgccccagga ggcctggtac ccagtgagaa gccacccatg
1081 atgccccagg ctcagccagc catccccaga cctaaccggt tattcctacg gcagcttcgg
1141 gcatctcact tgggaaatga gctggaaggc accgaggaac tgtgctgtgt agctgaactc
1201 gacaacccca tgcagcagaa gtggaccaag cccgcgaggg ctggatccga ggtggagtgg
1261 acagaagacc tggcactgga tctgggcccc cagagccggg agctgaccct caaagtgctg
1321 aggagcagca gctgtggaga caccgaactc ctaggccagg ccacactgcc tgtgggctcc
1381 ccctccagac cactgtctcg aagacagttg tgcccactca ccccagggcc agggaaagcc
1441 ctgggaccag cagccaccat ggcagtggag cttcactatg aggagggctc tccccggaac
1501 ctgggtactc ccacctcctc cactccacgc cccagcatca cacctaccaa gaagattgag
1561 cttgaccgga ccatcatgcc cgatggcacc attgtcacca cagtcaccac tgtccagtcc
1621 cggccccgta tagacggcaa attagactcc ccctcccgct ccccgtccaa ggtggaggtg
1681 accgagaaga cgacaactgt gctgagtgag agcagtggcc ccagcaatac ctcccatagc
1741 agcagccggg acagccacct ttccaacggc ttggaccctg tagcagagac agcgattcgc
1801 cagctgacag agcccagtgg gcgggtggcc aagaagacac ccaccaagcg cagcactctc
1861 atcatctctg gtgtttccaa ggtgcccatt gctcaggacg agttggcgct atccctgggc
1921 tatgcggcat ccctggaagc ctcagtgcag gatgatgcag ggaccagcgg aggcccctct
1981 tcacctccct cagacccacc agccatgtct ccaggaccgc tagatgccct ctctagtccc
2041 acaagtgtcc aggaagcaga cgagacaacc cgttcggata tttctgagag gccatctgtg
2101 gatgatattg agtcggaaac ggggtccact ggtgccctgg agacccgcag cctcaaggat
2161 cacaaagtga gtttcctgcg cagcggcact aagctcatct tccgccggag gcctaggcag
2221 aaggaagctg gcctgagcca atcacacgat gacctctcca acgcaacggc cacgcccagt
2281 gtccgaaaga aggccggcag cttttctcgc cgccttatca agcgcttttc cttcaaatcc
2341 aaacccaagg ccaatggtaa ccccagcccc cagctctgag gacccagctc tgaaagggca
2401 cgagttctct cagcccattc cccacctccc cttccatacc ccttcctgga tctccagtgc
2461 ctgggccagg aaagccctct gggttccggg aagccccgtc caccctgggc catggggccg
2521 gttggaagga tacttggaac gggaagcaca tgagaggtgg gcacccggtg ccgaggacat
2581 ggacgaggga ctggtggctg ggagggagag gagggccctg tccggcatgt gtgggtattc
2641 cccagaagca tttgcctcct gctgagcctg gtccctgagc ggagtcccag ggtgctcagc
2701 tcttcagctg acccttcttc ccttatttat tctcttttct atttatatgt gtggcttagg
2761 accctccgtg aacagatgat agagggcatc tctcccaggt gacccttctt ttctgtccca
2821 ggagggtggg taattccctt tgggatgggg ctcccacacc tccctcaggt ccccactcag
2881 accagcacca gtgtctgcct ctgagaatgt tggcagctca cagagagcag ggccggcccg
2941 ggatgggggg caggtactcc ccaccttcct gcctcccctc ctgctcctca tccctccctc
3001 cccctttatt accgtttttt gtacttgatg ccttctctgt gagcagtggc tctgtgggaa
3061 ggagggagcc gggagcctgg tgggaagcct tccccagaga gatggcttta ggggctttat
3121 ttaaagactg tgatgatgga gccacgcaag gctgcacctc tgtgtgttgg gagacgatga
3181 tgatgtccat tgctgtgtga tggcttggaa tttaatttat taaagtcaaa ttggagttta
3241 aaaaaaaaaa aaaaaaaaaa aaaaaa
//