LOCUS BC022198 1037 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LSM4 homolog, U6 small nuclear RNA associated (S.
cerevisiae), mRNA (cDNA clone MGC:4705 IMAGE:3534432), complete
cds.
ACCESSION BC022198
VERSION BC022198.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1037)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1037)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC022198.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33620778.
FEATURES Location/Qualifiers
source 1..1037
/db_xref="H-InvDB:HIT000039411"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4705 IMAGE:3534432"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1037
/gene="LSM4"
/gene_synonym="YER112W"
/db_xref="GeneID:25804"
/db_xref="HGNC:HGNC:17259"
/db_xref="MIM:607284"
CDS 50..469
/gene="LSM4"
/gene_synonym="YER112W"
/codon_start=1
/product="LSM4 homolog, U6 small nuclear RNA associated
(S. cerevisiae)"
/protein_id="AAH22198.1"
/db_xref="GeneID:25804"
/db_xref="HGNC:HGNC:17259"
/db_xref="MIM:607284"
/translation="MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVI
CTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGR
GMGGAGRGVFGGRGRGGIPGTGRGQPEKKPGRQAGKQ"
BASE COUNT 235 a 280 c 316 g 206 t
ORIGIN
1 gcagcggcgg cggcggaagt ggccggcgag cccggtcccc gccggcacca tgcttccctt
61 gtcactgctg aagacggctc agaatcaccc catgttggtg gagctgaaaa atggggagac
121 gtacaatgga cacctggtga gctgcgacaa ctggatgaac attaacctgc gagaagtcat
181 ctgcacgtcc agggacgggg acaagttctg gcggatgccc gagtgctaca tccgcggcag
241 caccatcaag tacctgcgca tccccgacga gatcatcgac atggtcaagg aggaggtggt
301 ggccaagggc cgcggccgcg gaggcctgca gcagcagaag cagcagaaag gccgcggcat
361 gggcggcgct ggccgaggtg tgtttggtgg ccggggccga ggtgggatcc cgggcacagg
421 cagaggccag ccagagaaga agcctggcag acaggcgggc aaacagtgag cgcccaccca
481 gaccggctgc tgcgccccct cctgccaggg tggcgattcc gctccacagt ctcggacgga
541 tctgctcaga aaggaagagg caggcgccag ggggaacccc cttcgtgttt tgtgaccctc
601 ccttttaggt gaagcccctt tttcttgcta aaaccggcaa ttctccggtt agaaatgtta
661 cttggtgttt tttggttttg tgaaacggcc gtcccaaagc tggctggatt cctagaagag
721 tctgtgttga aggcatcttt caagccctcg ctctggttct cagggcagca ttttccaggc
781 gggtttgttt tgcatttctt ggagcctctc cgagcagcaa ccagacggga gatttttatt
841 ttaagctgtt catgctggga ctgacagcct gcagggtttc cttgggcgcg gccccaaaat
901 tgccttcaaa acaaacccgg gacggttgaa agccttcgaa ccgtgcaggg gatgcctcgg
961 gccctggccc ttcgcttcct ctcttgtgtt atggaaataa aaacaaataa aactacaaaa
1021 aaaaaaaaaa aaaaaaa
//