LOCUS BC022091 2599 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sideroflexin 2, mRNA (cDNA clone MGC:4567
IMAGE:3029622), complete cds.
ACCESSION BC022091
VERSION BC022091.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2599)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2599)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC022091.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222270.
FEATURES Location/Qualifiers
source 1..2599
/db_xref="H-InvDB:HIT000039400"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4567 IMAGE:3029622"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2599
/gene="SFXN2"
/db_xref="GeneID:118980"
/db_xref="HGNC:HGNC:16086"
CDS 167..1135
/gene="SFXN2"
/codon_start=1
/product="sideroflexin 2"
/protein_id="AAH22091.1"
/db_xref="GeneID:118980"
/db_xref="HGNC:HGNC:16086"
/translation="MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELD
WAKVMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMII
TGFMLQFYRTMPAVIFWQWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVAT
AVGMNMLTKKAPPLVGRWVPFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSR
RAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLI
FMVPVACGLFPQKCELPVSYLEPKLQDTIKAKYGELEPYVYFNKGL"
BASE COUNT 648 a 672 c 648 g 631 t
ORIGIN
1 gcgggagcct cccggcctgg gattggtcga aaaggagggg cgtggggcgg gcgtgggggc
61 agttccccag cccaggtcct cctctcaccc gggccagttt tcaaggcggg ctgtaactgg
121 tggcatttgt cccgggacca ggtccacagt tttatgtgtg agcaagatgg aggctgacct
181 gtctggcttt aacatcgatg ccccccgttg ggaccagcgc accttcctgg ggagagtgaa
241 gcacttccta aacatcacgg acccccgcac tgtctttgta tctgagcggg agctggactg
301 ggccaaggtg atggtggaga agagcaggat gggggttgtg cccccaggca cccaagtgga
361 gcagctgctg tatgccaaga agctgtatga ctcggccttc caccccgaca ctggggagaa
421 gatgaatgtc atcgggcgca tgtctttcca gcttcctggc ggcatgatca tcacgggctt
481 catgctccag ttctacagga cgatgccggc ggtgatcttc tggcagtggg tgaaccagtc
541 cttcaatgcc ttagtcaact acaccaacag gaatgcggct tcccccacat cagtcaggca
601 gatggccctt tcctacttca cagccacaac cactgctgtg gccacggctg tgggcatgaa
661 catgttgaca aagaaagcgc cgcccttggt gggccgctgg gtgccctttg ccgctgtggc
721 tgcggctaac tgtgtcaata tccccatgat gcgacagcag gagctcataa agggaatctg
781 cgtgaaggac aggaatgaaa atgagattgg tcattcccgg agagctgcgg ccataggcat
841 cacccaagta gttatttctc ggatcaccat gtcagctcct gggatgatct tgctgccagt
901 catcatggaa aggcttgaga aattgcactt catgcagaaa gtcaaggtcc tgcacgcccc
961 attgcaggtc atgctgagcg ggtgcttcct catcttcatg gtgccagtgg cgtgtgggct
1021 tttcccacag aaatgtgaat tgccagtttc ctatctggaa ccgaagctcc aagacactat
1081 caaggccaag tatggagaac ttgagcctta tgtctacttc aataagggtc tctaaatgcc
1141 ccacttcagc aaggaccagt ctattcccat attcaccagc tcctccttag ctacgtgcac
1201 acttgtgtcc tccttcccct ttgccaacaa ggcctgaagg ccagggtaga ttggggggtg
1261 ggacaatgaa tgcctcatac ttacaccctg gtactggttg attggacctc agggaaaaaa
1321 agtgaaaaag ggtagcaaag gccaatgtct tctagctgct tcctcaaccc ctgtcccctg
1381 gagaccagaa gctgaggccc tctcagggag gagacatcca agcaaatcat ttggaaaagt
1441 taggaaacct ttaggattct ggttccagcc agggttgagg aaaggacctt ggatcaaaag
1501 gaagcttcta tacctctttc ttcttcgctt cctcctctcc caagcaatgg aaacttttac
1561 ccatgtaatt ctagctgaac tcaggaaaaa gaagggggaa aggactctgt ccccttgggg
1621 ctcatcaccc ttccacatcc tcctcctcgt tgccccctgg tcaggcagct tctttttttt
1681 tttttcaaga tggagtcttg ctctgtcgcc caggctggaa tgcagtggcg cgatctcggc
1741 tcactgcaaa ctctgcctcc tggattcaag cgattctcct gcctcagcct ctcaagtagc
1801 tgggattaca gggcacctgc caccacgcct ggctaatttt tgtattttag tggagacggg
1861 gtttcaccat gctggccaga ctggtctcga actcctgacc tcaggtgatc cgcccgcctc
1921 agcctctgaa attgctggga ttacaggcat gagccaccac acccagcccg gacagcttct
1981 ttgggagtgc tgctaacctt gaaattatca gacacttagg agttattagt gctaaaaagg
2041 ggaccgtgca aggcagcaga gttacatggt tcttcaaatc atgtctgaac ctattcttgg
2101 aatcttctct ataataaggg aagttctctt accccactgc cacatacctc tgttttaaaa
2161 gataagtcca ctaactgtga gtaaaaatga tatatatagg cattaaccac acactttaat
2221 gggtataatt tcctggctgc ctcccttcct cagcccatta ggttaaacac caaagaaaga
2281 ctggtgtgta ctgaatagga aagggaagtt ttatttggaa ccttctaaga ggaaatcaac
2341 caggaccaaa gagccttaaa ggacacacag caatgcacag ccacttccct tccccagctt
2401 ggctgcccta ggtgatttct caagctcctt gggggactgt tgtttctcat ctggaatcaa
2461 tgtgtgtatg agttttgtct ggtaggattg ctgactctgt ccaacagata tcactgtgaa
2521 ttgaataaat ttgttgaaag agcacacagg cacacataaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaa
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