LOCUS BC022080 1129 bp mRNA linear HUM 19-NOV-2007
DEFINITION Homo sapiens KH homology domain containing 1, mRNA (cDNA clone
MGC:33485 IMAGE:4813061), complete cds.
ACCESSION BC022080
VERSION BC022080.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1129)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1129)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC022080.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: d Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361930.
FEATURES Location/Qualifiers
source 1..1129
/db_xref="H-InvDB:HIT000039390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33485 IMAGE:4813061"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1129
/gene="KHDC1"
/gene_synonym="bA257K9.4"
/gene_synonym="NDG1"
/db_xref="GeneID:80759"
/db_xref="HGNC:HGNC:21366"
CDS 410..901
/gene="KHDC1"
/gene_synonym="bA257K9.4"
/gene_synonym="NDG1"
/codon_start=1
/product="KHDC1 protein"
/protein_id="AAH22080.1"
/db_xref="GeneID:80759"
/db_xref="HGNC:HGNC:21366"
/translation="MDMGTSALSKKPWWTLPQNFHAPMVFHMEEDQEELIFGHGDTYL
RCIEVHSHTLIQLESWFTATGQTRVTVGPHRARQWLLHMFCCVGSQDSYHHARGLEML
ERVRSQPLTNDDLVTSISVPPYTGDLSLAPRISGTVCLSVPQPSPYQVIGCSGFHLSS
LYP"
BASE COUNT 248 a 305 c 317 g 259 t
ORIGIN
1 gcgggcctcg cgcggccgcg gcgcgagccg ggacccctgg aagggtcggg tgcgcggccc
61 aggaggtacc gctgtctcct cacaatcggc caggcctgca gccgctgccg ccgccgccgc
121 cgccgccgcc ctactcaggg agtggcccag gcctgcggcg cgccaccctc acctccttca
181 ttcctaccgt caaagcccag ccttggctac ctgacccccc tgtggtctcg aactcggtta
241 gtccggtgaa gggacagaga agcctgggtt cccggcggca tcactgagat gctcagtcct
301 gaattctgcc ctccattagg attatctgct ttgtgggata atttcctcat tggttgagtc
361 agtgagttgc gtgtctgcaa gagagcatcc tatctggtcg gagcagagca tggacatggg
421 aacgagtgct ctcagcaaga agccgtggtg gaccctgcct caaaactttc atgcaccaat
481 ggtgtttcac atggaagagg accaggagga gctcatcttc gggcatggtg acacatacct
541 tcgctgcatt gaggtgcaca gccacaccct tattcagctg gagagttggt tcacagctac
601 aggccagact cgtgtgactg ttggaccaca cagggcaagg cagtggctgc tgcacatgtt
661 ttgttgtgtg gggagccagg actcctatca tcatgctcga ggcctggaga tgctggaacg
721 tgtccgaagc cagcctctga ccaacgatga cctggtcacc tccattagtg tgccaccata
781 cactggagac ctgtctttgg ctcccaggat aagtggaacc gtgtgtctta gcgttcctca
841 gccttcccct taccaagtga ttggttgttc gggtttccat ttgagttcac tgtatccgta
901 attaaggact gatctcccct gggaagtggg gatgagagga gaaatcttgg cttcactttt
961 ggtgagaaag acatgataga cactgaggaa agtttgaact tgtggccggg acctgtccct
1021 ctcaggtctt ctagacatgt ctgagggaag tctcttgaat gtaagaaagt gttattggca
1081 aagcaatcca ataaaataag ctacctatga tgcaaaaaaa aaaaaaaaa
//